RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 MTO1Q9Y2Z2 717 aaKnown RBP14.9□□□□□ -0.02
CD48-201ENST00000368045 TCRBV9S1A1TA0A576 114 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 TRDMT1O14717 391 aaKnown RBP14.9□□□□□ -0.02
CD48-201ENST00000368045 KLF11O14901 512 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 ITGBL1O95965 494 aaPredicted RBP14.9□□□□□ -0.02
CD48-201ENST00000368045 LMNAP02545 664 aaKnown RBP14.9□□□□□ -0.02
CD48-201ENST00000368045 PDGFRAP16234 1089 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 DESP17661 470 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 ETV4P43268 484 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 TAF5Q15542 800 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 TAF1BQ53T94 588 aaPredicted RBP14.9□□□□□ -0.02
CD48-201ENST00000368045 CCDC62Q6P9F0 684 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 CYP4V2Q6ZWL3 525 aaPredicted RBP14.9□□□□□ -0.02
CD48-201ENST00000368045 EEPD1Q7L9B9 569 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 SLC26A11Q86WA9 606 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 TRIM42Q8IWZ5 723 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 TMEM192Q8IY95 271 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.9□□□□□ -0.02
CD48-201ENST00000368045 RXFP2Q8WXD0 754 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 LRRC39Q96DD0 335 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 HPDLQ96IR7 371 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 TSSK1BQ9BXA7 367 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 TBC1D10AQ9BXI6 508 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 SLC17A7Q9P2U7 560 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 HMGXB4Q9UGU5 601 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 ZNF180Q9UJW8 692 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 CSADQ9Y600 493 aa14.9□□□□□ -0.02
CD48-201ENST00000368045 BRCA1P38398 1863 aaKnown RBP14.89□□□□□ -0.03
CD48-201ENST00000368045 BCLAF3A2AJT9 711 aaKnown RBP14.89□□□□□ -0.03
CD48-201ENST00000368045 KBTBD13C9JR72 458 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 H7C0C1 242 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 DIAPH2O60879 1101 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 CNMDO75829 334 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 TOMM70O94826 608 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 C22orf31O95567 290 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 SETSIPP0DME0 302 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 IBSPP21815 317 aaPredicted RBP14.89□□□□□ -0.03
CD48-201ENST00000368045 ATP5OP48047 213 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 CLCN3P51790 818 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 HIRAP54198 1017 aaPredicted RBP14.89□□□□□ -0.03
CD48-201ENST00000368045 YWHAGP61981 247 aaKnown RBP eCLIP14.89□□□□□ -0.03
CD48-201ENST00000368045 RBP5P82980 135 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 KRT81Q14533 505 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 LGSNQ5TDP6 509 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 TTC39BQ5VTQ0 682 aaPredicted RBP14.89□□□□□ -0.03
CD48-201ENST00000368045 SH2D5Q6ZV89 423 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 LONP2Q86WA8 852 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 IGDCC3Q8IVU1 814 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 ENDOVQ8N8Q3 282 aaKnown RBP14.89□□□□□ -0.03
CD48-201ENST00000368045 FAM13CQ8NE31 585 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 FAF2Q96CS3 445 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 FGD4Q96M96 766 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 MINDY3Q9H8M7 445 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 USP29Q9HBJ7 922 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 MKS1Q9NXB0 559 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 C2CD2Q9Y426 696 aa14.89□□□□□ -0.03
CD48-201ENST00000368045 DNAJC25-GNG10A0A024R161 153 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 A0A0G2JLL6 359 aaPredicted RBP14.88□□□□□ -0.03
CD48-201ENST00000368045 CALB2P22676 271 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 SNX16P57768 344 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 FAAP100Q0VG06 881 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 ORC1Q13415 861 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 TMEM132DQ14C87 1099 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 AMHR2Q16671 573 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 CTC1Q2NKJ3 1217 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 KBTBD12Q3ZCT8 623 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 FAM91A1Q658Y4 838 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 OR6B2Q6IFH4 312 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 GADL1Q6ZQY3 521 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 PRRT2Q7Z6L0 340 aaPredicted RBP14.88□□□□□ -0.03
CD48-201ENST00000368045 MTDHQ86UE4 582 aaKnown RBP14.88□□□□□ -0.03
CD48-201ENST00000368045 PLD5Q8N7P1 536 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 MCUQ8NE86 351 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 STK32AQ8WU08 396 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 TRAPPC12Q8WVT3 735 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 KLC2Q9H0B6 622 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 PDZD7Q9H5P4 517 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 GBA2Q9HCG7 927 aaPredicted RBP14.88□□□□□ -0.03
CD48-201ENST00000368045 SLC5A4Q9NY91 659 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 ERAP1Q9NZ08 941 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 KANSL3Q9P2N6 904 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 APOL1O14791 398 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 PEX10O60683 326 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 CCDC22O60826 627 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 KRT37O76014 449 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 HAUS5O94927 633 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 LUC7L3O95232 432 aaKnown RBP14.88□□□□□ -0.03
CD48-201ENST00000368045 RPSAP08865 295 aaKnown RBP14.88□□□□□ -0.03
CD48-201ENST00000368045 SNRPAP09012 282 aaKnown RBP14.88□□□□□ -0.03
CD48-201ENST00000368045 PRKCHP24723 683 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 ARFIP2P53365 341 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 MMRN1Q13201 1228 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 KRT72Q14CN4 511 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 PRKD1Q15139 912 aaPredicted RBP14.88□□□□□ -0.03
CD48-201ENST00000368045 PLEKHG4Q58EX7 1191 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 CMPK2Q5EBM0 449 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 SLC9A4Q6AI14 798 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 ZNF449Q6P9G9 518 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 NPNTQ6UXI9 565 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 FAM183BPQ6ZVS7 135 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms