RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 CDK16Q00536 496 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 LPCAT4Q643R3 524 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 ATG16L1Q676U5 607 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 RSBN1LQ6PCB5 846 aaPredicted RBP11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 ZNF677Q86XU0 584 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 WDR75Q8IWA0 830 aaKnown RBP11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 RBM15BQ8NDT2 890 aaKnown RBP11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 CLEC4DQ8WXI8 215 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 INPP5DQ92835 1189 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 USP18Q9UMW8 372 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 APOBEC2Q9Y235 224 aaKnown RBP11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 CDK5RAP2Q96SN8 1893 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 C4BPAP04003 597 aaKnown RBP11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 ITGB3P05106 788 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 CXCL8P10145 99 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 CCNB1P14635 433 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 OSBPP22059 807 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 GARTP22102 1010 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 SP100P23497 879 aaPredicted RBP11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 CDKN2BP42772 138 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 RPS6KA3P51812 740 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 AP2B1P63010 937 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 KLF1Q13351 362 aaPredicted RBP11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 PTPN20Q4JDL3 420 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 ZC3H12AQ5D1E8 599 aaKnown RBP11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 RIPOR1Q6ZS17 1223 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 GALNT4Q8N4A0 578 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 EBF4Q9BQW3 602 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 NRBP2Q9NSY0 501 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 DDX56Q9NY93 547 aaKnown RBP11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 SHOC2Q9UQ13 582 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 DNAJC16Q9Y2G8 782 aa11.48□□□□□ -0.57
NECTIN4-201ENST00000368012 LDHAP00338 332 aaKnown RBP11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 SNRPAP09012 282 aaKnown RBP11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 C6orf222P0C671 652 aaPredicted RBP11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 KDELR1P24390 212 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 GCAP28676 217 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 C1QBPQ07021 282 aaKnown RBP11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 HIC1Q14526 733 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 PARP6Q2NL67 630 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 TNFAIP8L3Q5GJ75 292 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 WASHC2DQ5SRD0 308 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 VWA5B1Q5TIE3 1220 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 CDHR3Q6ZTQ4 885 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 PGLYRP2Q96PD5 576 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 NIF3L1Q9GZT8 377 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 CXorf49A8MYA2 514 aaPredicted RBP11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 E5RJQ4 531 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 E9PBE3 544 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 GOLGA8TH3BQL2 631 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 KLHL41O60662 606 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 PGM3O95394 542 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 STAT5BP51692 787 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 MOGSQ13724 837 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 TTLL12Q14166 644 aaPredicted RBP11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 PLEKHA7Q6IQ23 1121 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 KDELC2Q7Z4H8 507 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 DNAAF3Q8N9W5 541 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 TTC13Q8NBP0 860 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 CPXM1Q96SM3 734 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 APOL2Q9BQE5 337 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 STRA6Q9BX79 667 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 SBF2Q86WG5 1849 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 NHSQ6T4R5 1651 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 B4GALT5O43286 388 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 CREB3O43889 395 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 USP12O75317 370 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 LRCH4O75427 683 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 KRT38O76015 456 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 PROCP04070 461 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 PRKCBP05771 671 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 PDGFRBP09619 1106 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 CLCN3P51790 818 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 RAPH1Q70E73 1250 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 MAP7D3Q8IWC1 876 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 SCUBE3Q8IX30 993 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 RAB3IL1Q8TBN0 382 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 RXFP2Q8WXD0 754 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 ATP2A3Q93084 1043 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 ABTB1Q969K4 478 aaPredicted RBP11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 SCYL1Q96KG9 808 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 KLC2Q9H0B6 622 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 WWP1Q9H0M0 922 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 RPF1Q9H9Y2 349 aaKnown RBP11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 COQ4Q9Y3A0 265 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 NUMBLQ9Y6R0 609 aa11.47□□□□□ -0.57
NECTIN4-201ENST00000368012 A6NJR5 290 aa11.46□□□□□ -0.57
NECTIN4-201ENST00000368012 H0YCG3 227 aa11.46□□□□□ -0.57
NECTIN4-201ENST00000368012 HMGCRP04035 888 aa11.46□□□□□ -0.57
NECTIN4-201ENST00000368012 CYP1A1P04798 512 aaPredicted RBP11.46□□□□□ -0.57
NECTIN4-201ENST00000368012 TYK2P29597 1187 aa11.46□□□□□ -0.57
NECTIN4-201ENST00000368012 GRIA1P42261 906 aa11.46□□□□□ -0.57
NECTIN4-201ENST00000368012 TMEM62Q0P6H9 643 aa11.46□□□□□ -0.57
NECTIN4-201ENST00000368012 FSTL1Q12841 308 aa11.46□□□□□ -0.57
NECTIN4-201ENST00000368012 C11orf91Q3C1V1 193 aa11.46□□□□□ -0.57
NECTIN4-201ENST00000368012 MMEL1Q495T6 779 aa11.46□□□□□ -0.57
NECTIN4-201ENST00000368012 NBPF12Q5TAG4 269 aaPredicted RBP11.46□□□□□ -0.57
NECTIN4-201ENST00000368012 CWF19L1Q69YN2 538 aaKnown RBP11.46□□□□□ -0.57
NECTIN4-201ENST00000368012 TRMT10BQ6PF06 316 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms