RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 DACH2Q96NX9 599 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 SEZ6LQ9BYH1 1024 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 ASIC3Q9UHC3 531 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 MYL2P10916 166 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 MAPK8P45983 427 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 JAK3P52333 1124 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 SRP54P61011 504 aaKnown RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 KMT5BQ4FZB7 885 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 RAB43Q86YS6 212 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 AIFM3Q96NN9 605 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 SNX18Q96RF0 628 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 OXCT2Q9BYC2 517 aaPredicted RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 FAM49BQ9NUQ9 324 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 LRP2BPQ9P2M1 347 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TC2NQ8N9U0 490 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TUBGCP2Q9BSJ2 902 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 E2F8A0AVK6 867 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 SP4Q02446 784 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 MIER2Q8N344 545 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PTPRN2Q92932 1015 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 LRRC1Q9BTT6 524 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 KCTD5Q9NXV2 234 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 CHSY1Q86X52 802 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 ERI1Q8IV48 349 aaKnown RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 LZTR1Q8N653 840 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 FANCBQ8NB91 859 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 BICC1Q9H694 974 aaKnown RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TNPO3Q9Y5L0 923 aaKnown RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 IGSF1Q8N6C5 1336 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 RIMBP2O15034 1052 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PTBP1P26599 531 aaKnown RBP eCLIP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 SLCO1A2P46721 670 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TNFAIP2Q03169 654 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 BAATQ14032 418 aaPredicted RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PPM1LQ5SGD2 360 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 BHLHB9Q6PI77 547 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 RHPN2Q8IUC4 686 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 ERP44Q9BS26 406 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PAG1Q9NWQ8 432 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 KLF15Q9UIH9 416 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PDPK1O15530 556 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 CAPGP40121 348 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PSMD5Q16401 504 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 UGT3A2Q3SY77 523 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 FAM109AQ8N4B1 249 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 CD248Q9HCU0 757 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 CYLDQ9NQC7 956 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 SCN3BQ9NY72 215 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 STOX2Q9P2F5 926 aaPredicted RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 SEPT9Q9UHD8 586 aaPredicted RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 AFG3L2Q9Y4W6 797 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PARP3Q9Y6F1 533 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 CRCPO75575 148 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 EIF4BP23588 611 aaKnown RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 AKAP5P24588 427 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 IL12RB1P42701 662 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 RAD23BP54727 409 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 ARL6IP1Q15041 203 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 VPS72Q15906 364 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 ENDOVQ8N8Q3 282 aaKnown RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PLBD2Q8NHP8 589 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 GAREM1Q9H706 876 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TMEM216Q9P0N5 145 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 ITGAVP06756 1048 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 RBP1P09455 135 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 FAM58BPP0C7Q3 252 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PRKAA1Q13131 559 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 KRT78Q8N1N4 520 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 POC5Q8NA72 575 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 SEMA4CQ9C0C4 833 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 RPAP3Q9H6T3 665 aaPredicted RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 SLAMF7Q9NQ25 335 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 KLQ9UEF7 1012 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 DDX20Q9UHI6 824 aaKnown RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PCDHA12Q9UN75 941 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TRIM13O60858 407 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 MAP3K6O95382 1288 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 LY86O95711 162 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 C8BP07358 591 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 MTHFD1P11586 935 aaKnown RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 GMPRP36959 345 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 RCN2Q14257 317 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 STK33Q9BYT3 514 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 EHD4Q9H223 541 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 NOD2Q9HC29 1040 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 SPATA31A6Q5VVP1 1343 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TMEM114B3SHH9 223 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 E9PAM4 449 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 NR1I2O75469 434 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 FAM13AO94988 1023 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 RPS6KA2Q15349 733 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 GALNT13Q8IUC8 556 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 ANKS1AQ92625 1134 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PI4K2AQ9BTU6 479 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 RNPEPQ9H4A4 650 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 AVENQ9NQS1 362 aaPredicted RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 ADPRHL2Q9NX46 363 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 ROBO2Q9HCK4 1378 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 BANF1O75531 89 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TMEM253P0C7T8 217 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms