RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 HIC1Q14526 733 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 PTPN20Q4JDL3 420 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 WDR78Q5VTH9 848 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 TTC39BQ5VTQ0 682 aaPredicted RBP8.52□□□□□ -1.05
CD46-208ENST00000367042 CWF19L1Q69YN2 538 aaKnown RBP8.52□□□□□ -1.05
CD46-208ENST00000367042 TREML1Q86YW5 311 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 NAT8LQ8N9F0 302 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 PTCD3Q96EY7 689 aaKnown RBP8.52□□□□□ -1.05
CD46-208ENST00000367042 WNK4Q96J92 1243 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 IFT122Q9HBG6 1241 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 ETAA1Q9NY74 926 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 MYH9P35579 1960 aaKnown RBP8.52□□□□□ -1.05
CD46-208ENST00000367042 INO80B-WBP1J3KQ70 363 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 TRAFD1O14545 582 aaPredicted RBP8.52□□□□□ -1.05
CD46-208ENST00000367042 NPTXRO95502 500 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 OSBPP22059 807 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 MIPP30301 263 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 PTGER2P43116 358 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 STX3Q13277 289 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 LBRQ14739 615 aaKnown RBP8.52□□□□□ -1.05
CD46-208ENST00000367042 DUOXA2Q1HG44 320 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 ARMC3Q5W041 872 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 NIPA1Q7RTP0 329 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 SLC26A11Q86WA9 606 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 KBTBD2Q8IY47 623 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 ULK2Q8IYT8 1036 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 TMEM130Q8N3G9 435 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 SLC35B2Q8TB61 432 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 NLRP4Q96MN2 994 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 EBF4Q9BQW3 602 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 INO80BQ9C086 356 aaPredicted RBP8.52□□□□□ -1.05
CD46-208ENST00000367042 NIF3L1Q9GZT8 377 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 HAPLN2Q9GZV7 340 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 ZNF302Q9NR11 478 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 STRIP2Q9ULQ0 834 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 PCNTO95613 3336 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 hCG_2014768A0A024R1R8 64 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 DCAF8L1A6NGE4 600 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 CXorf49A8MYA2 514 aaPredicted RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 WDR46O15213 610 aaKnown RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 PRPSAP2O60256 369 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 LYPLA1O75608 230 aaPredicted RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 KRT38O76015 456 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 TNNC2P02585 160 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 RARBP10826 455 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 KCNA4P22459 653 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 GSTT1P30711 240 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 RGS7P49802 495 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 SLC18A1P54219 525 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 RPL10AP62906 217 aaKnown RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 PDE1BQ01064 536 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 PEX6Q13608 980 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 PRKG1Q13976 671 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 PRKD1Q15139 912 aaPredicted RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 C15orf59Q2T9L4 293 aaPredicted RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 XKR3Q5GH77 459 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 TCHHL1Q5QJ38 904 aaPredicted RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 RABGAP1LQ5R372 815 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 PPP1R2P3Q6NXS1 205 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 POLNQ7Z5Q5 900 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 WDR75Q8IWA0 830 aaKnown RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 LRRC71Q8N4P6 559 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 TTLL6Q8N841 843 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 RNF217Q8TC41 542 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 SKA1Q96BD8 255 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 HEXIM2Q96MH2 286 aaKnown RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 WDR83Q9BRX9 315 aaKnown RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 MRIQ9BWK5 157 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 PHACTR1Q9C0D0 580 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 CYLDQ9NQC7 956 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 TXNDC16Q9P2K2 825 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 ARHGAP28Q9P2N2 729 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 ZNF212Q9UDV6 495 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 USP18Q9UMW8 372 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 FZD1Q9UP38 647 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 FARP1Q9Y4F1 1045 aaPredicted RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 RGPD3A6NKT7 1758 aaPredicted RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 RGPD4Q7Z3J3 1758 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 ZNF646O15015 1829 aaPredicted RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 A0A1B0GVG6 124 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 TTLL13PA6NNM8 815 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 ZMPSTE24O75844 475 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 PDGFRAP16234 1089 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 RANBP1P43487 201 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 BCAR1P56945 870 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 CUL3Q13618 768 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 PPP2R5DQ14738 602 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 TRIP10Q15642 601 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 SH3PXD2AQ5TCZ1 1133 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 LPCAT4Q643R3 524 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 DRICH1Q6PGQ1 229 aaPredicted RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 MFN1Q8IWA4 741 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 TRIM42Q8IWZ5 723 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 NSUN6Q8TEA1 469 aaKnown RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 TUBGCP5Q96RT8 1024 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 MMP19Q99542 508 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 NTPCRQ9BSD7 190 aaKnown RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 KCNK13Q9HB14 408 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 SLC38A10Q9HBR0 1119 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 TAGLN3Q9UI15 199 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms