RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 CTAGE1Q96RT6 745 aa5.98□□□□□ -1.45
RNU4-4P-201ENST00000364588 RMDN3Q96TC7 470 aa5.98□□□□□ -1.45
RNU4-4P-201ENST00000364588 PITHD1Q9GZP4 211 aaPredicted RBP5.98□□□□□ -1.45
RNU4-4P-201ENST00000364588 HAPLN2Q9GZV7 340 aa5.98□□□□□ -1.45
RNU4-4P-201ENST00000364588 POFUT1Q9H488 388 aa5.98□□□□□ -1.45
RNU4-4P-201ENST00000364588 H2AFY2Q9P0M6 372 aaPredicted RBP5.98□□□□□ -1.45
RNU4-4P-201ENST00000364588 TRANK1O15050 2925 aa5.98□□□□□ -1.45
RNU4-4P-201ENST00000364588 ABCB11O95342 1321 aa5.98□□□□□ -1.45
RNU4-4P-201ENST00000364588 TTC28Q96AY4 2481 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 DOCK5Q9H7D0 1870 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 NBNO60934 754 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 BAIAP3O94812 1187 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 CFBP00751 764 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 PARP1P09874 1014 aaKnown RBP5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 ZNF286BP0CG31 522 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 CKBP12277 381 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 MYCLP12524 364 aaPredicted RBP5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 INSRRP14616 1297 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 CASTP20810 708 aaKnown RBP5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 WDR5P61964 334 aaKnown RBP5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 PHC1P78364 1004 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 DUSP8Q13202 625 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 NOLC1Q14978 699 aaKnown RBP eCLIP5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 PRKD1Q15139 912 aaPredicted RBP5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 SEPT7Q16181 437 aaKnown RBP5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 AAK1Q2M2I8 961 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 TCTN1Q2MV58 587 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 ASPRV1Q53RT3 343 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 ARHGEF16Q5VV41 709 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 ESPNLQ6ZVH7 1005 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 LRRC8DQ7L1W4 858 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 KANSL1Q7Z3B3 1105 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 PALM2Q8IXS6 379 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 ENAHQ8N8S7 591 aaPredicted RBP5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 CAGE1Q8TC20 777 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 AFAP1L1Q8TED9 768 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 GDPD5Q8WTR4 605 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 WDR92Q96MX6 357 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 MTG2Q9H4K7 406 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 JMJD4Q9H9V9 463 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 PXMP2Q9NR77 195 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 DIAPH3Q9NSV4 1193 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 HDAC6Q9UBN7 1215 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 MTUS1Q9ULD2 1270 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 MRPL11Q9Y3B7 192 aaKnown RBP5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 SIP14410 1827 aa5.97□□□□□ -1.45
RNU4-4P-201ENST00000364588 BAZ2BQ9UIF8 2168 aaKnown RBP5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 TLDC2A0PJX2 215 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 LPXNO60711 386 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 EIF3JO75822 258 aaKnown RBP5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 PRPF6O94906 941 aaKnown RBP5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 APOL3O95236 402 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 IGHDP01880 384 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 MYCLP1P12525 358 aaPredicted RBP5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 POU3F3P20264 500 aaPredicted RBP5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 HSD3B2P26439 372 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 HOXA13P31271 388 aaPredicted RBP5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 LSP1P33241 339 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 ADAM15Q13444 863 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 PUM1Q14671 1186 aaKnown RBP eCLIP5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 PCBP1Q15365 356 aaKnown RBP eCLIP5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 IMMTQ16891 758 aaKnown RBP5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 KIAA0753Q2KHM9 967 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 GAGE13Q4V321 117 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 CCDC178Q5BJE1 867 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 IFIT1BQ5T764 474 aaKnown RBP5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 ZNF618Q5T7W0 954 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 SESTD1Q86VW0 696 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 CHD1LQ86WJ1 897 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 TICAM2Q86XR7 235 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 SMC5Q8IY18 1101 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 IL31RAQ8NI17 732 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 ANKS1AQ92625 1134 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 RABGGTAQ92696 567 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 EDAQ92838 391 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 NKD2Q969F2 451 aaPredicted RBP5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 HIST1H2AHQ96KK5 128 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 WWC2-AS2Q96NR7 200 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 IWS1Q96ST2 819 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 ADOQ96SZ5 270 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 HIST1H2AJQ99878 128 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 UBAC1Q9BSL1 405 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 MYL10Q9BUA6 226 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 SLC6A15Q9H2J7 730 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 TESMINQ9Y4I5 508 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 MICAL3Q7RTP6 2002 aa5.96□□□□□ -1.46
RNU4-4P-201ENST00000364588 A0A0A6YYJ9 748 aa5.95□□□□□ -1.46
RNU4-4P-201ENST00000364588 ABHD14A-ACY1A0A1B0GW23 586 aa5.95□□□□□ -1.46
RNU4-4P-201ENST00000364588 LINC01553A4QN01 128 aa5.95□□□□□ -1.46
RNU4-4P-201ENST00000364588 KLRF2D3W0D1 207 aa5.95□□□□□ -1.46
RNU4-4P-201ENST00000364588 HAS3O00219 553 aa5.95□□□□□ -1.46
RNU4-4P-201ENST00000364588 OPHN1O60890 802 aa5.95□□□□□ -1.46
RNU4-4P-201ENST00000364588 GJB5O95377 273 aa5.95□□□□□ -1.46
RNU4-4P-201ENST00000364588 GGPS1O95749 300 aa5.95□□□□□ -1.46
RNU4-4P-201ENST00000364588 CXCL10P02778 98 aa5.95□□□□□ -1.46
RNU4-4P-201ENST00000364588 HSD17B4P51659 736 aa5.95□□□□□ -1.46
RNU4-4P-201ENST00000364588 SP2Q02086 613 aa5.95□□□□□ -1.46
RNU4-4P-201ENST00000364588 NUCB1Q02818 461 aa5.95□□□□□ -1.46
RNU4-4P-201ENST00000364588 HHEXQ03014 270 aa5.95□□□□□ -1.46
RNU4-4P-201ENST00000364588 RIN1Q13671 783 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms