RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 MAP3K10Q02779 954 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 GIMAP4Q9NUV9 329 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 SMIM31A0A1B0GVY4 71 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 KPNA4O00629 521 aaPredicted RBP14.43□□□□□ -0.1
SMC5-201ENST00000361138 PROCP04070 461 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 PTGER2P43116 358 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 RBP5P82980 135 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 LBRQ14739 615 aaKnown RBP14.43□□□□□ -0.1
SMC5-201ENST00000361138 RNF220Q5VTB9 566 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 ABRAQ8N0Z2 381 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 DDX50Q9BQ39 737 aaKnown RBP14.43□□□□□ -0.1
SMC5-201ENST00000361138 TCF7L2Q9NQB0 619 aa14.43□□□□□ -0.1
SMC5-201ENST00000361138 TLR2O60603 784 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 ZNF23P17027 643 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 FAM13CQ8NE31 585 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 MED15Q96RN5 788 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 NRDE2Q9H7Z3 1164 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 USP18Q9UMW8 372 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 RPS6KL1Q9Y6S9 549 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 DDX3YO15523 660 aaKnown RBP14.42□□□□□ -0.1
SMC5-201ENST00000361138 HNRNPRO43390 633 aaKnown RBP14.42□□□□□ -0.1
SMC5-201ENST00000361138 USP33Q8TEY7 942 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 SPATA31A6Q5VVP1 1343 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 MYO1GB0I1T2 1018 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 C2CD2LO14523 706 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 TGM2P21980 687 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 CLK1P49759 484 aaKnown RBP14.42□□□□□ -0.1
SMC5-201ENST00000361138 CCDC153Q494R4 210 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 TRIM60Q495X7 471 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 RIN3Q8TB24 985 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 ACTL9Q8TC94 416 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 DCUN1D5Q9BTE7 237 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 WDR47O94967 919 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 PAEPP09466 180 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 MXD4Q14582 209 aaPredicted RBP14.42□□□□□ -0.1
SMC5-201ENST00000361138 GLMNQ92990 594 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 TLCD1Q96CP7 247 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 COPS7BQ9H9Q2 264 aaPredicted RBP14.42□□□□□ -0.1
SMC5-201ENST00000361138 FAM49BQ9NUQ9 324 aa14.42□□□□□ -0.1
SMC5-201ENST00000361138 HEATR9A2RTY3 570 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 DMC1Q14565 340 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 TMEM132DQ14C87 1099 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 HHIPL2Q6UWX4 724 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 RBM44Q6ZP01 1051 aaKnown RBP14.41□□□□□ -0.1
SMC5-201ENST00000361138 ASAP3Q8TDY4 903 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 ACAD9Q9H845 621 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 HOXC10Q9NYD6 342 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 TIMM44O43615 452 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 MPOP05164 745 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 GARTP22102 1010 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 MARCKSL1P49006 195 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 ACVR2BQ13705 512 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 MFSD5Q6N075 450 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 TRAF7Q6Q0C0 670 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 CCDC81Q6ZN84 652 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 SLC12A4Q9UP95 1085 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 SORCS3Q9UPU3 1222 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 SAC3D1A6NKF1 404 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 NPTX2P47972 431 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 FUT11Q495W5 492 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 HGSNATQ68CP4 663 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 FOXR2Q6PJQ5 311 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 NT5C1AQ9BXI3 368 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 RUBCNLQ9H714 662 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.41□□□□□ -0.1
SMC5-201ENST00000361138 MYO5BQ9ULV0 1848 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 TYW5A2RUC4 315 aaKnown RBP14.41□□□□□ -0.1
SMC5-201ENST00000361138 BCL10O95999 233 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 SP100P23497 879 aaPredicted RBP14.41□□□□□ -0.1
SMC5-201ENST00000361138 ZCCHC23Q6ZST2 131 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 TNFRSF25Q93038 417 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 EGFL8Q99944 293 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 TTYH3Q9C0H2 523 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 ERVK-5Q9HDB9 667 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 OLA1Q9NTK5 396 aaKnown RBP14.41□□□□□ -0.1
SMC5-201ENST00000361138 SUPT3HB4E1H0 165 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 KCNQ2O43526 872 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 CYTH3O43739 400 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 EDF1O60869 148 aaKnown RBP14.41□□□□□ -0.1
SMC5-201ENST00000361138 ZSCAN5DPP0CG00 497 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 HSD17B4P51659 736 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 CASP5P51878 434 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 MFSD7Q6UXD7 560 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 ISLR2Q6UXK2 745 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 ATPAF2Q8N5M1 289 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 CALML6Q8TD86 181 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 NDNQ99608 321 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 CGRRF1Q99675 332 aa14.41□□□□□ -0.1
SMC5-201ENST00000361138 FAM49AQ9H0Q0 323 aaPredicted RBP14.41□□□□□ -0.1
SMC5-201ENST00000361138 CFAP99D6REC4 459 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 FDX1P10109 184 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 ARP10275 920 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 ETS2P15036 469 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 STAT5BP51692 787 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 STRA8Q7Z7C7 330 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 C4orf32Q8N8J7 132 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 DNAJC19Q96DA6 116 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 SIK2Q9H0K1 926 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 RPAP3Q9H6T3 665 aaPredicted RBP14.4□□□□□ -0.1
SMC5-201ENST00000361138 CLIC5Q9NZA1 410 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms