RNA–Protein interactions for RNA: ENST00000360752.4

RDH16-201, Transcript of retinol dehydrogenase 16, humanhuman

TSL 1 (best)

Gene RDH16, Length 3,198 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16-201ENST00000360752 PPP6R3Q5H9R7 873 aaPredicted RBP10.15□□□□□ -0.78
RDH16-201ENST00000360752 CASC4Q6P4E1 433 aa10.15□□□□□ -0.78
RDH16-201ENST00000360752 DNAJC14Q6Y2X3 702 aaPredicted RBP10.15□□□□□ -0.78
RDH16-201ENST00000360752 LRRC71Q8N4P6 559 aa10.15□□□□□ -0.78
RDH16-201ENST00000360752 IFT43Q96FT9 208 aa10.15□□□□□ -0.78
RDH16-201ENST00000360752 VCX3BQ9H321 246 aa10.15□□□□□ -0.78
RDH16-201ENST00000360752 VCX3AQ9NNX9 186 aa10.15□□□□□ -0.78
RDH16-201ENST00000360752 SLC17A6Q9P2U8 582 aa10.15□□□□□ -0.78
RDH16-201ENST00000360752 SLC24A2Q9UI40 661 aa10.15□□□□□ -0.78
RDH16-201ENST00000360752 PACSIN3Q9UKS6 424 aa10.15□□□□□ -0.78
RDH16-201ENST00000360752 ZNRF3Q9ULT6 936 aa10.15□□□□□ -0.78
RDH16-201ENST00000360752 GREB1LQ9C091 1923 aaPredicted RBP10.15□□□□□ -0.79
RDH16-201ENST00000360752 OPHN1O60890 802 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 LRCH4O75427 683 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 WFS1O76024 890 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 CALB1P05937 261 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 GARTP22102 1010 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 AQP5P55064 265 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 CDH6P55285 790 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 ZNF200P98182 395 aaPredicted RBP10.14□□□□□ -0.79
RDH16-201ENST00000360752 PTP4A2Q12974 167 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 PEX6Q13608 980 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 EFHC2Q5JST6 749 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 WASHC2DQ5SRD0 308 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 IZUMO2Q6UXV1 221 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 PHF13Q86YI8 300 aaPredicted RBP10.14□□□□□ -0.79
RDH16-201ENST00000360752 KBTBD2Q8IY47 623 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 UBA3Q8TBC4 463 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 OXNAD1Q96HP4 312 aaPredicted RBP10.14□□□□□ -0.79
RDH16-201ENST00000360752 TUBGCP5Q96RT8 1024 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 SRPK1Q96SB4 655 aaKnown RBP10.14□□□□□ -0.79
RDH16-201ENST00000360752 APOL6Q9BWW8 343 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 ASCC2Q9H1I8 757 aaPredicted RBP10.14□□□□□ -0.79
RDH16-201ENST00000360752 ST6GALNAC4Q9H4F1 302 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.14□□□□□ -0.79
RDH16-201ENST00000360752 IQANK1A0A1B0GTG1 560 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 MAGEB2O15479 319 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 MAGEB3O15480 346 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 KCNN4O15554 427 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 CCND2P30279 289 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 GMPRP36959 345 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 CDK16Q00536 496 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 CTC1Q2NKJ3 1217 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 ZNF699Q32M78 642 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.14□□□□□ -0.79
RDH16-201ENST00000360752 PTPN20Q4JDL3 420 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 TRIM72Q6ZMU5 477 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 KIAA0319LQ8IZA0 1049 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 SAMD3Q8N6K7 520 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 BANPQ8N9N5 519 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 DCAKDQ8WVC6 231 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 PPP1R36Q96LQ0 422 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 TRAPPC9Q96Q05 1148 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 ACSS3Q9H6R3 686 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 CLIC5Q9NZA1 410 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 AHDC1Q5TGY3 1603 aaPredicted RBP10.14□□□□□ -0.79
RDH16-201ENST00000360752 APBA3O96018 575 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 HADHQ16836 314 aaKnown RBP10.14□□□□□ -0.79
RDH16-201ENST00000360752 C15orf59Q2T9L4 293 aaPredicted RBP10.14□□□□□ -0.79
RDH16-201ENST00000360752 PABPC1LQ4VXU2 614 aaKnown RBP10.14□□□□□ -0.79
RDH16-201ENST00000360752 FAM102AQ5T9C2 384 aaPredicted RBP10.14□□□□□ -0.79
RDH16-201ENST00000360752 RSPH3Q86UC2 560 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 HOMEZQ8IX15 550 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 DTNBP1Q96EV8 351 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 ATXN7L3BQ96GX2 97 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 MMP19Q99542 508 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 NGRNQ9NPE2 291 aaKnown RBP10.14□□□□□ -0.79
RDH16-201ENST00000360752 IL1RAPL1Q9NZN1 696 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 ZNF711Q9Y462 761 aa10.14□□□□□ -0.79
RDH16-201ENST00000360752 CXorf49A8MYA2 514 aaPredicted RBP10.13□□□□□ -0.79
RDH16-201ENST00000360752 ZC3H11AO75152 810 aaKnown RBP eCLIP10.13□□□□□ -0.79
RDH16-201ENST00000360752 PDE5AO76074 875 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 STK10O94804 968 aaKnown RBP10.13□□□□□ -0.79
RDH16-201ENST00000360752 OR6B1O95007 311 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 RGS7P49802 495 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 ATXN3P54252 364 aaPredicted RBP10.13□□□□□ -0.79
RDH16-201ENST00000360752 SLC34A1Q06495 639 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 BST1Q10588 318 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 FSTL1Q12841 308 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 C16orf46Q6P387 395 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 RSBN1LQ6PCB5 846 aaPredicted RBP10.13□□□□□ -0.79
RDH16-201ENST00000360752 LCA5Q86VQ0 697 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 TREML1Q86YW5 311 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 RBM15BQ8NDT2 890 aaKnown RBP10.13□□□□□ -0.79
RDH16-201ENST00000360752 SMC1BQ8NDV3 1235 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 PYDC1Q8WXC3 89 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 SLC38A10Q9HBR0 1119 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 DDX18Q9NVP1 670 aaKnown RBP10.13□□□□□ -0.79
RDH16-201ENST00000360752 CNTNAP1P78357 1384 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 LOC100653049A0A140TA62 436 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 TPD52L2O43399 206 aaKnown RBP10.13□□□□□ -0.79
RDH16-201ENST00000360752 LYPLA1O75608 230 aaPredicted RBP10.13□□□□□ -0.79
RDH16-201ENST00000360752 CIB2O75838 187 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 KRT34O76011 436 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 LYPLA2O95372 231 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 EGFRP00533 1210 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 ITGAVP06756 1048 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 TBXAS1P24557 533 aaPredicted RBP10.13□□□□□ -0.79
RDH16-201ENST00000360752 HMGCS2P54868 508 aa10.13□□□□□ -0.79
RDH16-201ENST00000360752 SNRPFP62306 86 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms