RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 OR7A2PQ8NGA2 310 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 C9orf16Q9BUW7 83 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 A0A0X1KG70 313 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 LOC100653049A0A140TA62 436 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 CBFA2T3O75081 653 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 ATP9AO75110 1047 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 YY1P25490 414 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 AQP5P55064 265 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 RHAGQ02094 409 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 FAM98CQ17RN3 349 aaKnown RBP9.59□□□□□ -0.87
VPS13A-203ENST00000360280 TRIM48Q8IWZ4 208 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 CPA5Q8WXQ8 436 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 CYLDQ9NQC7 956 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 H3BN98 237 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 TSPAN19P0C672 248 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 GABBR1Q9UBS5 961 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 PHF11Q9UIL8 331 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 RBP5P82980 135 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 ZNF184Q99676 751 aaPredicted RBP9.59□□□□□ -0.87
VPS13A-203ENST00000360280 HEY2Q9UBP5 337 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 EXOSC10Q01780 885 aaKnown RBP9.59□□□□□ -0.87
VPS13A-203ENST00000360280 CINPQ9BW66 212 aaPredicted RBP9.59□□□□□ -0.87
VPS13A-203ENST00000360280 CHID1Q9BWS9 393 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 ZNF112Q9UJU3 913 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 KATNA1O75449 491 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 ACLYP53396 1101 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 VAC14Q08AM6 782 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 NECTIN1Q15223 517 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 C1orf131Q8NDD1 294 aaKnown RBP9.59□□□□□ -0.87
VPS13A-203ENST00000360280 CAPSLQ8WWF8 208 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 JPH1Q9HDC5 661 aaPredicted RBP9.59□□□□□ -0.87
VPS13A-203ENST00000360280 RSL24D1Q9UHA3 163 aaKnown RBP9.59□□□□□ -0.87
VPS13A-203ENST00000360280 UQCRBP14927 111 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 TFDP3Q5H9I0 405 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 NUAK2Q9H093 628 aa9.59□□□□□ -0.87
VPS13A-203ENST00000360280 DDX18Q9NVP1 670 aaKnown RBP9.59□□□□□ -0.87
VPS13A-203ENST00000360280 BCLAF3A2AJT9 711 aaKnown RBP9.59□□□□□ -0.88
VPS13A-203ENST00000360280 PLEKHA8P1O95397 391 aa9.59□□□□□ -0.88
VPS13A-203ENST00000360280 ARF5P84085 180 aa9.59□□□□□ -0.88
VPS13A-203ENST00000360280 TBCELQ5QJ74 424 aa9.59□□□□□ -0.88
VPS13A-203ENST00000360280 ZNF614Q8N883 585 aa9.59□□□□□ -0.88
VPS13A-203ENST00000360280 KYQ8NBH2 561 aa9.59□□□□□ -0.88
VPS13A-203ENST00000360280 ZIM3Q96PE6 472 aa9.59□□□□□ -0.88
VPS13A-203ENST00000360280 EIF2AK1Q9BQI3 630 aaKnown RBP9.59□□□□□ -0.88
VPS13A-203ENST00000360280 COQ6Q9Y2Z9 468 aa9.59□□□□□ -0.88
VPS13A-203ENST00000360280 ABCA8O94911 1581 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 RPS6KA5O75582 802 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 ZNF605Q86T29 641 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 ZDHHC13Q8IUH4 622 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 GPRASP2Q96D09 838 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 MTA3Q9BTC8 594 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 TMEM117Q9H0C3 514 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 VTI1BQ9UEU0 232 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 NR5A2O00482 541 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 CYP26A1O43174 497 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 IDH3BO43837 385 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 SSTR3P32745 418 aaPredicted RBP9.58□□□□□ -0.88
VPS13A-203ENST00000360280 SNRPFP62306 86 aaKnown RBP9.58□□□□□ -0.88
VPS13A-203ENST00000360280 POMGNT2Q8NAT1 580 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 GMFBP60983 142 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 PLA2G4FQ68DD2 849 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 ANKRD7Q92527 254 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 PABPC3Q9H361 631 aaKnown RBP9.58□□□□□ -0.88
VPS13A-203ENST00000360280 MAPRE3Q9UPY8 281 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 RPS6KL1Q9Y6S9 549 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 SMIM22K7EJ46 135 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 P4HA2O15460 535 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 MGRN1O60291 552 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 PGS1Q32NB8 556 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 ZNF513Q8N8E2 541 aaPredicted RBP9.58□□□□□ -0.88
VPS13A-203ENST00000360280 WDR60Q8WVS4 1066 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 CCDC166P0CW27 439 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 GALCP54803 685 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 A0A1B0GTH6 734 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 FAM129BQ96TA1 746 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 FAM220AQ7Z4H9 259 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 PRDM5Q9NQX1 630 aaPredicted RBP9.58□□□□□ -0.88
VPS13A-203ENST00000360280 ASXL2Q76L83 1435 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 TMC2Q8TDI7 906 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 SYN2Q92777 582 aaPredicted RBP9.58□□□□□ -0.88
VPS13A-203ENST00000360280 RACGAP1Q9H0H5 632 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 WDR41Q9HAD4 459 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 HPCAL1P37235 193 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 CACNA2D1P54289 1103 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 SV2CQ496J9 727 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 CCDC162PA2VCL2 907 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 PHKG2P15735 406 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 AKR1D1P51857 326 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 SPIRE1Q08AE8 756 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 CCNIQ14094 377 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 CRNNQ9UBG3 495 aaPredicted RBP9.58□□□□□ -0.88
VPS13A-203ENST00000360280 AAR2Q9Y312 384 aaKnown RBP9.58□□□□□ -0.88
VPS13A-203ENST00000360280 SMNDC1O75940 238 aaKnown RBP eCLIP9.58□□□□□ -0.88
VPS13A-203ENST00000360280 CD4P01730 458 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 TTC27Q6P3X3 843 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 EXOC3L1Q86VI1 746 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 TDRD5Q8NAT2 981 aaKnown RBP9.58□□□□□ -0.88
VPS13A-203ENST00000360280 PDLIM2Q96JY6 352 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 GOLGA4Q13439 2230 aaKnown RBP9.58□□□□□ -0.88
VPS13A-203ENST00000360280 ECE2O60344 883 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms