RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 STAT5AP42229 794 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 ACOT2P49753 483 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 STAT5BP51692 787 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 GRSF1Q12849 480 aaKnown RBP eCLIP17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 NCOA4Q13772 614 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 ARID3BQ8IVW6 561 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 FAM20AQ96MK3 541 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 SLC9A8Q9Y2E8 581 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 MYL12BO14950 172 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 ERN1O75460 977 aaKnown RBP17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 PTGER2P43116 358 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 CACNB3P54284 484 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 NEDD8Q15843 81 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 ATP13A5Q4VNC0 1218 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 TSHZ1Q6ZSZ6 1077 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 OR2W6PQ8NHA6 318 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 USP27XA6NNY8 438 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 PABPC1P11940 636 aaKnown RBP17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 NFYCQ13952 458 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 PJA1Q8NG27 643 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 RAET1EQ8TD07 263 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 CCDC126Q96EE4 140 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 CCSER1Q9C0I3 900 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 CHKBQ9Y259 395 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 SNX9Q9Y5X1 595 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 PGBD2Q6P3X8 592 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 FAM228AQ86W67 206 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 MSR1P21757 451 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 MCCD1P59942 119 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 PFKFB3Q16875 520 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 IRAK1BP1Q5VVH5 260 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 SEL1L3Q68CR1 1132 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 SUGP1Q8IWZ8 645 aaKnown RBP17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 ZNF669Q96BR6 464 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 KANSL1LA0AUZ9 987 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 TNFRSF21O75509 655 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 FCGR1AP12314 374 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 BNC2Q6ZN30 1099 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 ADGRF4Q8IZF3 695 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 ZNF222Q9UK12 451 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 ARID1BQ8NFD5 2236 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 KCNQ3O43525 872 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 S100GP29377 79 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 TRAF3Q13114 568 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 SGF29Q96ES7 293 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 CHP2O43745 196 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 CBFA2T3O75081 653 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 FGRP09769 529 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 VAV1P15498 845 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 CASP4P49662 377 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 TMEM62Q0P6H9 643 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 ANTXR1Q9H6X2 564 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 AGAP1Q9UPQ3 857 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 AHCYL1O43865 530 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 TUBA3CQ13748 450 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 EIF2S3LQ2VIR3 472 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 USP13Q92995 863 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 CCDC28BQ9BUN5 200 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 P4HBP07237 508 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 CCDC166P0CW27 439 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 ITGA8P53708 1063 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 NAIF1Q69YI7 327 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 CCDC185Q8N715 623 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 SENP2Q9HC62 589 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 EXTL3O43909 919 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 PTPN1P18031 435 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 GMFBP60983 142 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 FAM111AQ96PZ2 611 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 MCUBQ9NWR8 336 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 LNPEPQ9UIQ6 1025 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 BMP10O95393 424 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 TSPAN19P0C672 248 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 LIFRP42702 1097 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 LIN54Q6MZP7 749 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 WDR24Q96S15 920 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 STK33Q9BYT3 514 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 DYRK1BQ9Y463 629 aa17.84■□□□□ 0.45
CACNA1A-201ENST00000360228 FIG4Q92562 907 aa17.83■□□□□ 0.45
CACNA1A-201ENST00000360228 TMEM260Q9NX78 707 aa17.83■□□□□ 0.45
CACNA1A-201ENST00000360228 ZCCHC7Q8N3Z6 543 aaKnown RBP17.83■□□□□ 0.45
CACNA1A-201ENST00000360228 ADGRG1Q9Y653 693 aa17.83■□□□□ 0.45
CACNA1A-201ENST00000360228 F8VZ95 297 aa17.83■□□□□ 0.44
CACNA1A-201ENST00000360228 KPNA5O15131 536 aa17.83■□□□□ 0.44
CACNA1A-201ENST00000360228 HK2P52789 917 aa17.83■□□□□ 0.44
CACNA1A-201ENST00000360228 C21orf59P57076 290 aa17.83■□□□□ 0.44
CACNA1A-201ENST00000360228 TGM3Q08188 693 aa17.83■□□□□ 0.44
CACNA1A-201ENST00000360228 GRIK3Q13003 919 aa17.83■□□□□ 0.44
CACNA1A-201ENST00000360228 PLA2G4FQ68DD2 849 aa17.83■□□□□ 0.44
CACNA1A-201ENST00000360228 LEMD2Q8NC56 503 aa17.83■□□□□ 0.44
CACNA1A-201ENST00000360228 SPIRE2Q8WWL2 714 aa17.83■□□□□ 0.44
CACNA1A-201ENST00000360228 ORAI2Q96SN7 254 aa17.83■□□□□ 0.44
CACNA1A-201ENST00000360228 PAIP1Q9H074 479 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-201ENST00000360228 DDX18Q9NVP1 670 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-201ENST00000360228 FAM25EA8MYX2 175 aa17.83■□□□□ 0.44
CACNA1A-201ENST00000360228 UMPSP11172 480 aa17.83■□□□□ 0.44
CACNA1A-201ENST00000360228 GLRBP48167 497 aa17.83■□□□□ 0.44
CACNA1A-201ENST00000360228 CYP24A1Q07973 514 aa17.83■□□□□ 0.44
CACNA1A-201ENST00000360228 OVGP1Q12889 678 aa17.83■□□□□ 0.44
CACNA1A-201ENST00000360228 BARGINQ6ZT62 677 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms