RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 HAUS5O94927 633 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 C6orf222P0C671 652 aaPredicted RBP11.64□□□□□ -0.55
SSU72-202ENST00000359060 CCDC130P13994 396 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 ADRA1DP25100 572 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 ASPAP45381 313 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 BMPR2Q13873 1038 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 SH3PXD2AQ5TCZ1 1133 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 ANKRD22Q5VYY1 191 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 RWDD4Q6NW29 188 aaKnown RBP11.64□□□□□ -0.55
SSU72-202ENST00000359060 BZW1Q7L1Q6 419 aaKnown RBP11.64□□□□□ -0.55
SSU72-202ENST00000359060 XYLT1Q86Y38 959 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 SLC4A11Q8NBS3 891 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 NETO2Q8NC67 525 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 TCP10LQ8TDR4 215 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 PPP4R1Q8TF05 950 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 PGBD4Q96DM1 585 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 FZD8Q9H461 694 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 SLC24A2Q9UI40 661 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 UBQLN1Q9UMX0 589 aaKnown RBP11.64□□□□□ -0.55
SSU72-202ENST00000359060 ADAMTS5Q9UNA0 930 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 A0A1B0GUA9 196 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 TRUB2O95900 331 aaKnown RBP11.64□□□□□ -0.55
SSU72-202ENST00000359060 DCAF4L1Q3SXM0 396 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 TMEM109Q9BVC6 243 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 SIK2Q9H0K1 926 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 VPS11Q9H270 941 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 R3HDMLQ9H3Y0 253 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 SMYD2Q9NRG4 433 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 CPA4Q9UI42 421 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 HAO1Q9UJM8 370 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 AP4E1Q9UPM8 1137 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 AVILO75366 819 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 CIB2O75838 187 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 RECQL4O94761 1208 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 IL1R2P27930 398 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 GDF10P55107 478 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 EFHC2Q5JST6 749 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 FBXO47Q5MNV8 452 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 PPP1R26Q5T8A7 1209 aaPredicted RBP11.64□□□□□ -0.55
SSU72-202ENST00000359060 POLNQ7Z5Q5 900 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 SPOCK2Q92563 424 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 VTA1Q9NP79 307 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 A0A0G2JLL6 359 aaPredicted RBP11.64□□□□□ -0.55
SSU72-202ENST00000359060 IQCA1LA6NCM1 817 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 ARHGAP42A6NI28 874 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 RRN3P2A6NIE6 340 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 PYGBP11216 843 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 ZNF143P52747 638 aaPredicted RBP11.64□□□□□ -0.55
SSU72-202ENST00000359060 SLC10A6Q3KNW5 377 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 DENND5BQ6ZUT9 1274 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 PRRT2Q7Z6L0 340 aaPredicted RBP11.64□□□□□ -0.55
SSU72-202ENST00000359060 CCDC125Q86Z20 511 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 ARMC2Q8NEN0 867 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 C12orf65Q9H3J6 166 aaKnown RBP11.64□□□□□ -0.55
SSU72-202ENST00000359060 MANSC1Q9H8J5 431 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 NOD2Q9HC29 1040 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 AAASQ9NRG9 546 aa11.64□□□□□ -0.55
SSU72-202ENST00000359060 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.64□□□□□ -0.55
SSU72-202ENST00000359060 CILPO75339 1184 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 ZWINTO95229 277 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 CD4P01730 458 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 SNRPAP09012 282 aaKnown RBP11.63□□□□□ -0.55
SSU72-202ENST00000359060 ZFXP17010 805 aaPredicted RBP11.63□□□□□ -0.55
SSU72-202ENST00000359060 CYP2F1P24903 491 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 TAF6P49848 677 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 ENPEPQ07075 957 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 KBTBD12Q3ZCT8 623 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 MDH1BQ5I0G3 518 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 MTHFD1LQ6UB35 978 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 RAPH1Q70E73 1250 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 RSPH3Q86UC2 560 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 TRABD2AQ86V40 505 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 TRIM42Q8IWZ5 723 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 CNPY4Q8N129 248 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 NDUFAF2Q8N183 169 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 PDCD7Q8N8D1 485 aaKnown RBP11.63□□□□□ -0.55
SSU72-202ENST00000359060 CFAP61Q8NHU2 1237 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 C18orf25Q96B23 403 aaPredicted RBP11.63□□□□□ -0.55
SSU72-202ENST00000359060 ALKBH8Q96BT7 664 aaKnown RBP11.63□□□□□ -0.55
SSU72-202ENST00000359060 PDZD7Q9H5P4 517 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 GGA2Q9UJY4 613 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 PCDHGC3Q9UN70 934 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 COL11A2P13942 1736 aaPredicted RBP11.63□□□□□ -0.55
SSU72-202ENST00000359060 GYG2O15488 501 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 ATP9BO43861 1147 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 PDK2Q15119 407 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 ATG16L1Q676U5 607 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 SLC27A1Q6PCB7 646 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 RFX8Q6ZV50 586 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 CRLF3Q8IUI8 442 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 ARHGAP24Q8N264 748 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 PPFIBP2Q8ND30 876 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 SLC2A14Q8TDB8 520 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 SCYL1Q96KG9 808 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 PPCSQ9HAB8 311 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.63□□□□□ -0.55
SSU72-202ENST00000359060 TIMM13Q9Y5L4 95 aaPredicted RBP11.63□□□□□ -0.55
SSU72-202ENST00000359060 EIF4E1BA6NMX2 242 aaKnown RBP11.63□□□□□ -0.55
SSU72-202ENST00000359060 H3BRJ5 948 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 M0QYT0 321 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms