RNA–Protein interactions for RNA: ENST00000358545.6

TNFSF11-202, Transcript of TNF superfamily member 11, humanhuman

TSL 1 (best) BASIC

Gene TNFSF11, Length 1,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-202ENST00000358545 RNF4P78317 190 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 SIM1P81133 766 aaPredicted RBP6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 CDC42EP1Q00587 391 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 PON2Q15165 354 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 TARBP2Q15633 366 aaKnown RBP6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 PRSS36Q5K4E3 855 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 FAM171A1Q5VUB5 890 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 WWC2Q6AWC2 1192 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 LETMD1Q6P1Q0 360 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 RAB11FIP4Q86YS3 637 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 CHCHD4Q8N4Q1 142 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 TTC8Q8TAM2 541 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 LNX1Q8TBB1 728 aaPredicted RBP6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 DEPDC1BQ8WUY9 529 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 RCC1LQ96I51 464 aaKnown RBP6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 MIPEPQ99797 713 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 LZTS2Q9BRK4 669 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 PAAF1Q9BRP4 392 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 TTPALQ9BTX7 342 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 MRPL4Q9BYD3 311 aaKnown RBP6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 DUSP15Q9H1R2 295 aaPredicted RBP6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 MINDY3Q9H8M7 445 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 IFT122Q9HBG6 1241 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 GP6Q9HCN6 339 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 UBN1Q9NPG3 1134 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 RIC8AQ9NPQ8 531 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 DIAPH3Q9NSV4 1193 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 TBC1D22BQ9NU19 505 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 ATP8A1Q9Y2Q0 1164 aa6.96□□□□□ -1.3
TNFSF11-202ENST00000358545 IGKV6-21A0A0C4DH24 114 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 PATE3B3GLJ2 98 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 SPECC1L-ADORA2AF8WAN1 911 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 PIK3R2O00459 728 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 DCLK1O15075 740 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 SHOXO15266 292 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 SART1O43290 800 aaKnown RBP6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 TBX1O43435 398 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 CHMP2AO43633 222 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 AKAP3O75969 853 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 C1QL1O75973 258 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 FOSP01100 380 aaPredicted RBP6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 PDGFRBP09619 1106 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 PLA2G2AP14555 144 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 RAB6AP20340 208 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 OR1D2P34982 312 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 CCR2P41597 374 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 DNM2P50570 870 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 ADCY7P51828 1080 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 SUMO1P63165 101 aaKnown RBP6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 SETQ01105 290 aaPredicted RBP6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 ELF2Q15723 593 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 UVSSAQ2YD98 709 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 CT47A1Q5JQC4 288 aaPredicted RBP6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 ANKRD45Q5TZF3 282 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 POMZP3Q6PJE2 187 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 RALYLQ86SE5 291 aaKnown RBP6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 CDH24Q86UP0 819 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 JAMLQ86YT9 394 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 CNNM3Q8NE01 707 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 ADCY4Q8NFM4 1077 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 RIN3Q8TB24 985 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 SMARCD2Q92925 531 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 MSANTD3Q96H12 275 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 MRGPRX3Q96LB0 322 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 ZSWIM3Q96MP5 696 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 CEP89Q96ST8 783 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 MAP3K14Q99558 947 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 SLC32A1Q9H598 525 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 ACSS3Q9H6R3 686 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 MKL2Q9ULH7 1088 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 TAF6LQ9Y6J9 622 aa6.95□□□□□ -1.3
TNFSF11-202ENST00000358545 PTPRQQ9UMZ3 2332 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 COL6A6A6NMZ7 2263 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 CASTOR2A6NHX0 329 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 HEPACAM2A8MVW5 462 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 RHOBTB1O94844 696 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 ALX3O95076 343 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 LRG1P02750 347 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 CENPBP07199 599 aaPredicted RBP6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 CALM1P0DP23 149 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 CALM2P0DP24 149 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 CALM3P0DP25 149 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 PTPN2P17706 415 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 SOX5P35711 763 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 PREPP48147 710 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 GNAQP50148 359 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 GRIK3Q13003 919 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 PRRT3Q5FWE3 981 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 JAKMIP3Q5VZ66 844 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 C1orf228Q6PIY5 440 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 SHISA2Q6UWI4 295 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 ARHGEF39Q8N4T4 335 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 GSTCDQ8NEC7 633 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 IGDCC4Q8TDY8 1250 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 CPB2Q96IY4 423 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 IL25Q9H293 177 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 NXF3Q9H4D5 531 aaKnown RBP6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 C8orf33Q9H7E9 229 aaPredicted RBP6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 POLR3BQ9NW08 1133 aaPredicted RBP6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 SLC8A2Q9UPR5 921 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms