RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 LRRC10BA6NIK2 292 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 CYP51A1Q16850 503 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 ARHGEF16Q5VV41 709 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 TCP10LQ8TDR4 215 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 OSBPL7Q9BZF2 842 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 CLK4Q9HAZ1 481 aaKnown RBP6.28□□□□□ -1.4
VPS13B-203ENST00000358544 TOMM70O94826 608 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 FGFR3P22607 806 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 SPRP35270 261 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-203ENST00000358544 TYSND1Q2T9J0 566 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 TRIQKQ629K1 86 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 MFSD5Q6N075 450 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 TDRD5Q8NAT2 981 aaKnown RBP6.28□□□□□ -1.4
VPS13B-203ENST00000358544 SETD9Q8NE22 299 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 SLC30A5Q8TAD4 765 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 VPS33AQ96AX1 596 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 ENTPD7Q9NQZ7 604 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 WBP11Q9Y2W2 641 aaKnown RBP6.28□□□□□ -1.4
VPS13B-203ENST00000358544 TESPA1A2RU30 521 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-203ENST00000358544 TTLL13PA6NNM8 815 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 GLRA3O75311 464 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 S100A9P06702 114 aaKnown RBP6.28□□□□□ -1.4
VPS13B-203ENST00000358544 TUBA3CQ13748 450 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 RSPH1Q8WYR4 309 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 TRIM8Q9BZR9 551 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 ETNK2Q9NVF9 386 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 CHD5Q8TDI0 1954 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 FLT1P17948 1338 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 SEMA3DO95025 777 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 COX4I1P13073 169 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 FDFT1P37268 417 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 GJB7Q6PEY0 223 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 UBE2Q1Q7Z7E8 422 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 PRKAG3Q9UGI9 489 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-203ENST00000358544 SAGE2PA6NJ88 616 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 ATP6V1B2P21281 511 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 RAB15P59190 212 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 ADAM17P78536 824 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 TSTA3Q13630 321 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-203ENST00000358544 PRKG1Q13976 671 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 RWDD4Q6NW29 188 aaKnown RBP6.28□□□□□ -1.4
VPS13B-203ENST00000358544 EFL1Q7Z2Z2 1120 aaKnown RBP6.28□□□□□ -1.4
VPS13B-203ENST00000358544 SRBD1Q8N5C6 995 aaKnown RBP6.28□□□□□ -1.4
VPS13B-203ENST00000358544 TLCD1Q96CP7 247 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 NXF1Q9UBU9 619 aaKnown RBP6.28□□□□□ -1.4
VPS13B-203ENST00000358544 SNPHO15079 494 aa6.27□□□□□ -1.4
VPS13B-203ENST00000358544 KCNN4O15554 427 aa6.27□□□□□ -1.4
VPS13B-203ENST00000358544 RFC4P35249 363 aa6.27□□□□□ -1.4
VPS13B-203ENST00000358544 TRAF3Q13114 568 aa6.27□□□□□ -1.4
VPS13B-203ENST00000358544 PDK1Q15118 436 aa6.27□□□□□ -1.4
VPS13B-203ENST00000358544 DDB1Q16531 1140 aa6.27□□□□□ -1.4
VPS13B-203ENST00000358544 EPC2Q52LR7 807 aa6.27□□□□□ -1.4
VPS13B-203ENST00000358544 AGKQ53H12 422 aa6.27□□□□□ -1.4
VPS13B-203ENST00000358544 ENOSF1Q7L5Y1 443 aa6.27□□□□□ -1.4
VPS13B-203ENST00000358544 VPS33BQ9H267 617 aa6.27□□□□□ -1.4
VPS13B-203ENST00000358544 JMJD4Q9H9V9 463 aa6.27□□□□□ -1.4
VPS13B-203ENST00000358544 TDRKHQ9Y2W6 561 aaKnown RBP6.27□□□□□ -1.4
VPS13B-203ENST00000358544 ERVV-2B6SEH9 535 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 KIAA0391O15091 583 aaKnown RBP6.27□□□□□ -1.41
VPS13B-203ENST00000358544 FAM20BO75063 409 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 APRTP07741 180 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 TOB1P50616 345 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-203ENST00000358544 ARPP19P56211 112 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 RIPPLY1Q0D2K3 151 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 ELMO2Q96JJ3 720 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 INPP4AQ96PE3 977 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-203ENST00000358544 MRASO14807 208 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 MTM1Q13496 603 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 ARL13BQ3SXY8 428 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 KRT73Q86Y46 540 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 SNX19Q92543 992 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 CNPY3Q9BT09 278 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 SPDYE16A6NNV3 312 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-203ENST00000358544 PSAPP07602 524 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 BMPR2Q13873 1038 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 QPRTQ15274 297 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 SPDYE2Q495Y8 402 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 SAMD4BQ5PRF9 694 aaKnown RBP6.27□□□□□ -1.41
VPS13B-203ENST00000358544 SVOPQ8N4V2 548 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 POC5Q8NA72 575 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 SERHL2Q9H4I8 314 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 SERHLQ9NQF3 203 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 USE1Q9NZ43 259 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 KANSL1LA0AUZ9 987 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 AGPSO00116 658 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 MAGEC1O60732 1142 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 ABHD2P08910 425 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 TTLL12Q14166 644 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-203ENST00000358544 FOXP4Q8IVH2 680 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-203ENST00000358544 TEX13BQ9BXU2 312 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 EFCAB1Q9HAE3 211 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 NRBP2Q9NSY0 501 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 SORCS3Q9UPU3 1222 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 PNPLA6Q8IY17 1366 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 CPA3P15088 417 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 ADSSP30520 456 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 SLC25A3Q00325 362 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 USP10Q14694 798 aaKnown RBP6.27□□□□□ -1.41
VPS13B-203ENST00000358544 SLC8A2Q9UPR5 921 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms