RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 GJA1P17302 382 aa7.61□□□□□ -1.19
VPS13A-202ENST00000357409 MAT2AP31153 395 aaKnown RBP7.61□□□□□ -1.19
VPS13A-202ENST00000357409 VGLL4Q14135 290 aa7.61□□□□□ -1.19
VPS13A-202ENST00000357409 TRIM69Q86WT6 500 aa7.61□□□□□ -1.19
VPS13A-202ENST00000357409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.61□□□□□ -1.19
VPS13A-202ENST00000357409 A8MU76 341 aa7.61□□□□□ -1.19
VPS13A-202ENST00000357409 PEX5P50542 639 aa7.61□□□□□ -1.19
VPS13A-202ENST00000357409 GNG14A0A1W2PPG7 69 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 RASSF10A6NK89 507 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 SLC25A27O95847 323 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 SLC2A4P14672 509 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 FMO4P31512 558 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 USP11P51784 963 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 AP2B1P63010 937 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 BFSP2Q13515 415 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 C16orf86Q6ZW13 317 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 POMGNT2Q8NAT1 580 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 NLGN2Q8NFZ4 835 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 KAT2AQ92830 837 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 MRPL17Q9NRX2 175 aaKnown RBP7.6□□□□□ -1.19
VPS13A-202ENST00000357409 RGS12O14924 1447 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 VWA5AO00534 786 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 PLA2G6O60733 806 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 NTSR2O95665 410 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 ETS1P14921 441 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 POLD2P49005 469 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 HPCAP84074 193 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 XRCC4Q13426 336 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 SLC29A2Q14542 456 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 GRIK4Q16099 956 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 FSCBQ5H9T9 825 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 MTSS1LQ765P7 747 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 TMPRSS9Q7Z410 1059 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 KRT77Q7Z794 578 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 SPATA4Q8NEY3 305 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 A0A1W2PQ27 194 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 A0A1W2PQ64 194 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 A0A1W2PQD8 194 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 FYNP06241 537 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 ODC1P11926 461 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 SERPINB3P29508 390 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 CD52P31358 61 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 PGM1P36871 562 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 ATP2C1P98194 919 aaPredicted RBP7.6□□□□□ -1.19
VPS13A-202ENST00000357409 LPIN1Q14693 890 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 GRAMD4Q6IC98 578 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 TMED8Q6PL24 325 aaPredicted RBP7.6□□□□□ -1.19
VPS13A-202ENST00000357409 ZNF438Q7Z4V0 828 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 ERO1BQ86YB8 467 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 LNX2Q8N448 690 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 FAM111AQ96PZ2 611 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 RBM15Q96T37 977 aaKnown RBP eCLIP7.6□□□□□ -1.19
VPS13A-202ENST00000357409 AAASQ9NRG9 546 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 HEATR9A2RTY3 570 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 PLA2G4AP47712 749 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 ARHGAP17Q68EM7 881 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 JSRP1Q96MG2 331 aaPredicted RBP7.6□□□□□ -1.19
VPS13A-202ENST00000357409 RHOBTB2Q9BYZ6 727 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 SPATC1LQ9H0A9 340 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.6□□□□□ -1.19
VPS13A-202ENST00000357409 RALBP11234 206 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 ARL6IP4Q66PJ3 421 aaKnown RBP7.6□□□□□ -1.19
VPS13A-202ENST00000357409 HELQQ8TDG4 1101 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 TFB1MQ8WVM0 346 aaKnown RBP7.6□□□□□ -1.19
VPS13A-202ENST00000357409 AUTS2Q8WXX7 1259 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 TKTL2Q9H0I9 626 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 ABCG4Q9H172 646 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 ZNF556Q9HAH1 456 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 ZNF212Q9UDV6 495 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 PIK3C2GO75747 1445 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 GMNCA6NCL1 334 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 IQCF5A8MTL0 148 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 RNASEH1O60930 286 aaKnown RBP7.6□□□□□ -1.19
VPS13A-202ENST00000357409 ARF5P84085 180 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 TBX2Q13207 712 aaPredicted RBP7.6□□□□□ -1.19
VPS13A-202ENST00000357409 INSCQ1MX18 579 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 TLK2Q86UE8 772 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 CATSPER2Q96P56 530 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 TBX20Q9UMR3 447 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 ASTN2O75129 1339 aaPredicted RBP7.6□□□□□ -1.19
VPS13A-202ENST00000357409 AOC2O75106 756 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 TP53BP2Q13625 1128 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 TKFCQ3LXA3 575 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 PRPF39Q86UA1 669 aaKnown RBP7.6□□□□□ -1.19
VPS13A-202ENST00000357409 CHPFQ8IZ52 775 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 SPPL2AQ8TCT8 520 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 TAS1R2Q8TE23 839 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 ELMO1Q92556 727 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 SCLYQ96I15 445 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 HSMCR30P0CW71 290 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 MYL2P10916 166 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 CD44P16070 742 aaKnown RBP7.6□□□□□ -1.19
VPS13A-202ENST00000357409 LAMTOR4Q0VGL1 99 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 ABRQ12979 859 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 VPS72Q15906 364 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 NAPRTQ6XQN6 538 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 ARHGEF19Q8IW93 802 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 TRIM15Q9C019 465 aa7.6□□□□□ -1.19
VPS13A-202ENST00000357409 EML4Q9HC35 981 aaKnown RBP7.6□□□□□ -1.19
VPS13A-202ENST00000357409 RAPGEF6Q8TEU7 1601 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms