RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 TMEM106CQ9BVX2 250 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 FOXP3Q9BZS1 431 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 SLC24A3Q9HC58 644 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 MLXIPLQ9NP71 852 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 UBN1Q9NPG3 1134 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 ASIC3Q9UHC3 531 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 CHORDC1Q9UHD1 332 aaPredicted RBP13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 PCDHB2Q9Y5E7 798 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 THAP12O43422 761 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 CD4P01730 458 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 CDR2Q01850 454 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 PTP4A2Q12974 167 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 DUOXA2Q1HG44 320 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 C15orf39Q6ZRI6 1047 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 TDRPQ86YL5 185 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 ATL2Q8NHH9 583 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 DDX1Q92499 740 aaKnown RBP13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 ZNF653Q96CK0 615 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 ZFP42Q96MM3 310 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 ADAM2Q99965 735 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 PITPNM3Q9BZ71 974 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 MYLK2Q9H1R3 596 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 USH1CQ9Y6N9 552 aa13.28□□□□□ -0.28
RTFDC1-202ENST00000357348 FAM47DPA6NHR8 397 aa13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 FOXO6A8MYZ6 492 aa13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 PRPF4O43172 522 aaKnown RBP eCLIP13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 GAS8O95995 478 aa13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 ATF2P15336 505 aa13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 GTF2H1P32780 548 aa13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 AFF1P51825 1210 aaKnown RBP13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 MYL6P60660 151 aa13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 FAAP100Q0VG06 881 aa13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 NR1H3Q13133 447 aa13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 NCOA4Q13772 614 aa13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 ACAD10Q6JQN1 1059 aa13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 APLFQ8IW19 511 aaPredicted RBP13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 ANKRD36BP1Q96IX9 119 aa13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 CCDC77Q9BR77 488 aa13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 TLE6Q9H808 572 aa13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 ACP6Q9NPH0 428 aa13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 FAM105AQ9NUU6 356 aa13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 NKX1-2Q9UD57 310 aaPredicted RBP13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 ANAPC5Q9UJX4 755 aa13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 CHKBQ9Y259 395 aa13.27□□□□□ -0.28
RTFDC1-202ENST00000357348 IL18RAPO95256 599 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 TNNC2P02585 160 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 ITGB3P05106 788 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 LINGO3P0C6S8 592 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 TPBGLP0DKB5 382 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 CYP11B1P15538 503 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 CYP2C18P33260 490 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 GCKP35557 465 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 KLF1Q13351 362 aaPredicted RBP13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 TRPC3Q13507 836 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 TMEM132DQ14C87 1099 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 TAF11Q15544 211 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 CCDC142Q17RM4 750 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 FAM26DQ5JW98 314 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 WASHC2DQ5SRD0 308 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 APBB1IPQ7Z5R6 666 aaPredicted RBP13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 SLC47A2Q86VL8 602 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 STK32AQ8WU08 396 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 C18orf25Q96B23 403 aaPredicted RBP13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 SLC7A6OSQ96CW6 309 aaPredicted RBP13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 HERPUD2Q9BSE4 406 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 HIPK3Q9H422 1215 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 GOLGA2P5Q9HBQ8 144 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 AVENQ9NQS1 362 aaPredicted RBP13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 ZFATQ9P243 1243 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 CACNG4Q9UBN1 327 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 COQ4Q9Y3A0 265 aa13.27□□□□□ -0.29
RTFDC1-202ENST00000357348 SCN1AP35498 2009 aa13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 CYP26A1O43174 497 aa13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 NBNO60934 754 aa13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 RPLP2P05387 115 aaKnown RBP13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 T-ENOLP0DO92 83 aa13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 SELPP16109 830 aa13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 SLC1A1P43005 524 aa13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 MFAP3P55082 362 aa13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 LRRC26Q2I0M4 334 aa13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 CEP128Q6ZU80 1094 aa13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 DEFB128Q7Z7B8 93 aa13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 TRABD2AQ86V40 505 aa13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 SRRM1Q8IYB3 904 aaKnown RBP13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 C1orf127Q8N9H9 656 aa13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 FAM13CQ8NE31 585 aa13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 DDX27Q96GQ7 796 aaKnown RBP13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 NT5C1BQ96P26 610 aa13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 APOBEC3GQ9HC16 384 aaKnown RBP13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 TUBGCP4Q9UGJ1 667 aa13.26□□□□□ -0.29
RTFDC1-202ENST00000357348 TLR3O15455 904 aaKnown RBP13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 CALCAP01258 141 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 COL6A1P12109 1028 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 EN2P19622 333 aaPredicted RBP13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 GCAP28676 217 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 MLH1P40692 756 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 SETDB1Q15047 1291 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 RASA2Q15283 850 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 SURF1Q15526 300 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 CCNG2Q16589 344 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms