RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 LRRC40Q9H9A6 602 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 NCANO14594 1321 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 CYP2D7A0A087X1C5 515 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 HACD1B0YJ81 288 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 SERPINA6P08185 405 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 RPA1P27694 616 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 CRABP2P29373 138 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 MCAMP43121 646 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 DDR2Q16832 855 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 LRRC36Q1X8D7 754 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 PIWIL4Q7Z3Z4 852 aaKnown RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 PACS2Q86VP3 889 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 TDRD5Q8NAT2 981 aaKnown RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 NGRNQ9NPE2 291 aaKnown RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 COL6A6A6NMZ7 2263 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 LDLRP01130 860 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 HLA-DPA1P20036 260 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 ELF3P78545 371 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 TNFAIP8L3Q5GJ75 292 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 PMF1Q6P1K2 205 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 KRT84Q9NSB2 600 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 DSEQ9UL01 958 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 WBP11Q9Y2W2 641 aaKnown RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 ALG6Q9Y672 507 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 H0YIN7 160 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 NCOA4Q13772 614 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 RASA2Q15283 850 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 NEK5Q6P3R8 708 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 DEPDC4Q8N2C3 294 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 IGDCC4Q8TDY8 1250 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 FAM162AQ96A26 154 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 TNPO3Q9Y5L0 923 aaKnown RBP6.78□□□□□ -1.32
VPS13B-202ENST00000357162 SAT1P21673 171 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 TTI2Q6NXR4 508 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 NANOGNBQ7Z5D8 188 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 KCNV2Q8TDN2 545 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 TMEM9Q9P0T7 183 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 EIF3LQ9Y262 564 aaKnown RBP6.78□□□□□ -1.32
VPS13B-202ENST00000357162 PPP1R3GB7ZBB8 358 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 GOLGA8SH3BPF8 625 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 RWDD4Q6NW29 188 aaKnown RBP6.78□□□□□ -1.32
VPS13B-202ENST00000357162 CATSPER3Q86XQ3 398 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 ZNF786Q8N393 782 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 WNK4Q96J92 1243 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 PIGUQ9H490 435 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 EXTL3O43909 919 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 PCNAP12004 261 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 RBP5P82980 135 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 HPCAP84074 193 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 PDCD4Q53EL6 469 aaKnown RBP6.78□□□□□ -1.32
VPS13B-202ENST00000357162 LACTB2Q53H82 288 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-202ENST00000357162 BBIP1A8MTZ0 92 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 CAND2O75155 1236 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 UBOX5O94941 541 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 SEMA3DO95025 777 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 TARSP26639 723 aaKnown RBP6.78□□□□□ -1.32
VPS13B-202ENST00000357162 EIF6P56537 245 aaKnown RBP6.78□□□□□ -1.32
VPS13B-202ENST00000357162 DIS3LQ8TF46 1054 aaKnown RBP6.78□□□□□ -1.32
VPS13B-202ENST00000357162 CAMKK2Q96RR4 588 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 BBS2Q9BXC9 721 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 PTBP2Q9UKA9 531 aaKnown RBP6.78□□□□□ -1.32
VPS13B-202ENST00000357162 LMTK3Q96Q04 1460 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 SCN9AQ15858 1988 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 MPOP05164 745 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 DYNLT1P63172 113 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 DCAF4L1Q3SXM0 396 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 SHQ1Q6PI26 577 aaKnown RBP6.78□□□□□ -1.32
VPS13B-202ENST00000357162 CDH24Q86UP0 819 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 RHOBTB2Q9BYZ6 727 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 C20orf96Q9NUD7 363 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-202ENST00000357162 R3HDM2Q9Y2K5 976 aaKnown RBP6.78□□□□□ -1.32
VPS13B-202ENST00000357162 MAGEC1O60732 1142 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 TPP2P29144 1249 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-202ENST00000357162 CDK18Q07002 472 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 MAPK11Q15759 364 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 TYSND1Q2T9J0 566 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 TTC23LQ6PF05 361 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 ABRAXAS1Q6UWZ7 409 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 THEM5Q8N1Q8 247 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 DPP10Q8N608 796 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 TRIM49D1C9J1S8 452 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 ITGAVP06756 1048 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 CAPGP40121 348 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 TPI1P60174 286 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 CYP4A11Q02928 519 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 PTGES3Q15185 160 aaKnown RBP6.78□□□□□ -1.32
VPS13B-202ENST00000357162 PTPAQ15257 358 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 EPHA7Q15375 998 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 POLNQ7Z5Q5 900 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 ZNF554Q86TJ5 538 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 EID3Q8N140 333 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 FCGR1BQ92637 280 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 RMI1Q9H9A7 625 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 CLK4Q9HAZ1 481 aaKnown RBP6.78□□□□□ -1.32
VPS13B-202ENST00000357162 ARHGEF38Q9NXL2 777 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 AGO2Q9UKV8 859 aaKnown RBP6.78□□□□□ -1.32
VPS13B-202ENST00000357162 ACACBO00763 2458 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 MPDZO75970 2070 aa6.78□□□□□ -1.32
VPS13B-202ENST00000357162 IFRD1O00458 451 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-202ENST00000357162 LDOC1O95751 146 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms