RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 ALLCQ8N6M5 410 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 RNF149Q8NC42 400 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 SNED1Q8TER0 1413 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 BORCS6Q96GS4 357 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 CLMNQ96JQ2 1002 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 SLITRK1Q96PX8 696 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 SERPINI1Q99574 410 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 TARS2Q9BW92 718 aaKnown RBP13.03□□□□□ -0.32
BDNF-202ENST00000356660 AVENQ9NQS1 362 aaPredicted RBP13.03□□□□□ -0.32
BDNF-202ENST00000356660 HOXC10Q9NYD6 342 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 THEGQ9P2T0 379 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 CNTNAP4Q9C0A0 1308 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 E9PBE3 544 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 KLHL41O60662 606 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 TCF4P15884 667 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 RPL22P35268 128 aaKnown RBP13.03□□□□□ -0.32
BDNF-202ENST00000356660 USP46P62068 366 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 PIGHQ14442 188 aaPredicted RBP13.03□□□□□ -0.32
BDNF-202ENST00000356660 ACAP1Q15027 740 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 SLC26A11Q86WA9 606 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 SLC9A9Q8IVB4 645 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 MICALL2Q8IY33 904 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 ZNF398Q8TD17 642 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 CD101Q93033 1021 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 PHACTR1Q9C0D0 580 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 GOLGA8QA0A0J9YX86 632 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 GOLGA8OA6NCC3 632 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 GOLGA8NF8WBI6 632 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 VAV1P15498 845 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 DSG3P32926 999 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 RPS6P62753 249 aaKnown RBP13.03□□□□□ -0.32
BDNF-202ENST00000356660 GABPAQ06546 454 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 MYBPC2Q14324 1141 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 ZNF699Q32M78 642 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 FNBP1LQ5T0N5 605 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 HELQQ8TDG4 1101 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 ZNF606Q8WXB4 792 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 RIT2Q99578 217 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 GRID1Q9ULK0 1009 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 RPL26L1Q9UNX3 145 aaKnown RBP13.03□□□□□ -0.32
BDNF-202ENST00000356660 POLRMTO00411 1230 aaKnown RBP13.02□□□□□ -0.32
BDNF-202ENST00000356660 SEC24DO94855 1032 aaPredicted RBP13.02□□□□□ -0.32
BDNF-202ENST00000356660 CIITAP33076 1130 aa13.02□□□□□ -0.32
BDNF-202ENST00000356660 GSTA3Q16772 222 aa13.02□□□□□ -0.32
BDNF-202ENST00000356660 PLEKHG4Q58EX7 1191 aa13.02□□□□□ -0.32
BDNF-202ENST00000356660 CATSPER4Q7RTX7 472 aa13.02□□□□□ -0.32
BDNF-202ENST00000356660 ENDOVQ8N8Q3 282 aaKnown RBP13.02□□□□□ -0.32
BDNF-202ENST00000356660 PLEKHO2Q8TD55 490 aa13.02□□□□□ -0.32
BDNF-202ENST00000356660 TRPV6Q9H1D0 765 aa13.02□□□□□ -0.32
BDNF-202ENST00000356660 CAAP1Q9H8G2 361 aa13.02□□□□□ -0.32
BDNF-202ENST00000356660 ZNF302Q9NR11 478 aa13.02□□□□□ -0.32
BDNF-202ENST00000356660 PPM1HQ9ULR3 514 aa13.02□□□□□ -0.32
BDNF-202ENST00000356660 PEX1O43933 1283 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 CYP3A4P08684 503 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 TBXAS1P24557 533 aaPredicted RBP13.02□□□□□ -0.33
BDNF-202ENST00000356660 IVDP26440 423 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 SERPINB5P36952 375 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 NUDT2P50583 147 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 CDC16Q13042 620 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 MTA1Q13330 715 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 PDK3Q15120 406 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 SLFN12LQ6IEE8 588 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 SATL1Q86VE3 508 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 ZNF677Q86XU0 584 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 ATG4CQ96DT6 458 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 TMA16Q96EY4 203 aaKnown RBP13.02□□□□□ -0.33
BDNF-202ENST00000356660 SPATA17Q96L03 361 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 NR1H4Q96RI1 486 aaPredicted RBP13.02□□□□□ -0.33
BDNF-202ENST00000356660 MRPL1Q9BYD6 325 aaKnown RBP13.02□□□□□ -0.33
BDNF-202ENST00000356660 ACSS3Q9H6R3 686 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 SLC38A10Q9HBR0 1119 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 XAB2Q9HCS7 855 aaKnown RBP13.02□□□□□ -0.33
BDNF-202ENST00000356660 ETNK2Q9NVF9 386 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 ZNRF3Q9ULT6 936 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 INPP5FQ9Y2H2 1132 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 UMODL1Q5DID0 1318 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 CICQ96RK0 1608 aaPredicted RBP13.02□□□□□ -0.33
BDNF-202ENST00000356660 CRCPO75575 148 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 KLHL2O95198 593 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 ESRRGP62508 458 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 PEX6Q13608 980 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 TFDP2Q14188 446 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 WDR72Q3MJ13 1102 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 RBM44Q6ZP01 1051 aaKnown RBP13.02□□□□□ -0.33
BDNF-202ENST00000356660 MCUQ8NE86 351 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 EME1Q96AY2 570 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 SLC10A4Q96EP9 437 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 TAAR1Q96RJ0 339 aa13.02□□□□□ -0.33
BDNF-202ENST00000356660 UBE2OQ9C0C9 1292 aaKnown RBP13.02□□□□□ -0.33
BDNF-202ENST00000356660 DNAAF2Q9NVR5 837 aaKnown RBP13.02□□□□□ -0.33
BDNF-202ENST00000356660 MAP3K13O43283 966 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 DCXO43602 365 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 TCEA3O75764 348 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 CFHP08603 1231 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 PMLP29590 882 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 FSCBQ5H9T9 825 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 DHDDSQ86SQ9 333 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 CMTM5Q96DZ9 223 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 FAM163AQ96GL9 167 aaPredicted RBP13.01□□□□□ -0.33
BDNF-202ENST00000356660 CCT7Q99832 543 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms