RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 ZFYVE27Q5T4F4 411 aa14.28□□□□□ -0.12
HOXA1-202ENST00000355633 KATNAL2Q8IYT4 538 aa14.28□□□□□ -0.12
HOXA1-202ENST00000355633 SLC39A11Q8N1S5 342 aa14.28□□□□□ -0.12
HOXA1-202ENST00000355633 NDRG1Q92597 394 aaKnown RBP14.28□□□□□ -0.12
HOXA1-202ENST00000355633 HTATIP2Q9BUP3 242 aa14.28□□□□□ -0.12
HOXA1-202ENST00000355633 PATJQ8NI35 1801 aa14.28□□□□□ -0.12
HOXA1-202ENST00000355633 TBC1D4O60343 1298 aa14.27□□□□□ -0.12
HOXA1-202ENST00000355633 ZRANB2O95218 330 aaKnown RBP eCLIP14.27□□□□□ -0.12
HOXA1-202ENST00000355633 GJB5O95377 273 aa14.27□□□□□ -0.12
HOXA1-202ENST00000355633 GLI1P08151 1106 aa14.27□□□□□ -0.12
HOXA1-202ENST00000355633 PCK1P35558 622 aa14.27□□□□□ -0.12
HOXA1-202ENST00000355633 DAOAP59103 153 aa14.27□□□□□ -0.12
HOXA1-202ENST00000355633 ATP11AP98196 1134 aa14.27□□□□□ -0.12
HOXA1-202ENST00000355633 SLC25A11Q02978 314 aaKnown RBP14.27□□□□□ -0.12
HOXA1-202ENST00000355633 KIAA1841Q6NSI8 718 aa14.27□□□□□ -0.12
HOXA1-202ENST00000355633 PRSS55Q6UWB4 352 aaPredicted RBP14.27□□□□□ -0.12
HOXA1-202ENST00000355633 VSTM1Q6UX27 236 aa14.27□□□□□ -0.12
HOXA1-202ENST00000355633 POLNQ7Z5Q5 900 aa14.27□□□□□ -0.12
HOXA1-202ENST00000355633 MMGT1Q8N4V1 131 aa14.27□□□□□ -0.12
HOXA1-202ENST00000355633 EXD1Q8NHP7 514 aa14.27□□□□□ -0.12
HOXA1-202ENST00000355633 PGLYRP2Q96PD5 576 aa14.27□□□□□ -0.12
HOXA1-202ENST00000355633 VN1R3Q9BXE9 311 aa14.27□□□□□ -0.12
HOXA1-202ENST00000355633 AP1M1Q9BXS5 423 aa14.27□□□□□ -0.12
HOXA1-202ENST00000355633 DDX56Q9NY93 547 aaKnown RBP14.27□□□□□ -0.12
HOXA1-202ENST00000355633 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.27□□□□□ -0.12
HOXA1-202ENST00000355633 SPG21Q9NZD8 308 aa14.27□□□□□ -0.12
HOXA1-202ENST00000355633 KRIT1O00522 736 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 DAB1O75553 588 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 ZBED1O96006 694 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 KRT7P08729 469 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 USP17L7P0C7H9 530 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 MIPP30301 263 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 PTPN9P43378 593 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 YWHAZP63104 245 aaKnown RBP14.27□□□□□ -0.13
HOXA1-202ENST00000355633 SMARCB1Q12824 385 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 GPR17Q13304 367 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 SMC1AQ14683 1233 aaKnown RBP14.27□□□□□ -0.13
HOXA1-202ENST00000355633 ATP13A4Q4VNC1 1196 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 ODF2Q5BJF6 829 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 SH3PXD2AQ5TCZ1 1133 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 TXNRD3NBQ6F5E7 133 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 RSPO2Q6UXX9 243 aaPredicted RBP14.27□□□□□ -0.13
HOXA1-202ENST00000355633 CCDC50Q8IVM0 306 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 SCN4BQ8IWT1 228 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 DEFB106AQ8N104 65 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 RIN2Q8WYP3 895 aaPredicted RBP14.27□□□□□ -0.13
HOXA1-202ENST00000355633 PIK3R5Q8WYR1 880 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 RBM41Q96IZ5 413 aaKnown RBP14.27□□□□□ -0.13
HOXA1-202ENST00000355633 NCAPGQ9BPX3 1015 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 ZBED2Q9BTP6 218 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 DDX23Q9BUQ8 820 aaKnown RBP14.27□□□□□ -0.13
HOXA1-202ENST00000355633 NGRNQ9NPE2 291 aaKnown RBP14.27□□□□□ -0.13
HOXA1-202ENST00000355633 CHST7Q9NS84 486 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 CXXC1Q9P0U4 656 aaPredicted RBP14.27□□□□□ -0.13
HOXA1-202ENST00000355633 MTRRQ9UBK8 725 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 KIAA1671Q9BY89 1806 aa14.27□□□□□ -0.13
HOXA1-202ENST00000355633 CCDC188H7C350 402 aa14.26□□□□□ -0.13
HOXA1-202ENST00000355633 SOD2P04179 222 aa14.26□□□□□ -0.13
HOXA1-202ENST00000355633 KRT1P04264 644 aa14.26□□□□□ -0.13
HOXA1-202ENST00000355633 IL1R2P27930 398 aa14.26□□□□□ -0.13
HOXA1-202ENST00000355633 MATKP42679 507 aa14.26□□□□□ -0.13
HOXA1-202ENST00000355633 MAGEA11P43364 429 aa14.26□□□□□ -0.13
HOXA1-202ENST00000355633 HTRA4P83105 476 aaPredicted RBP14.26□□□□□ -0.13
HOXA1-202ENST00000355633 PSMD5Q16401 504 aa14.26□□□□□ -0.13
HOXA1-202ENST00000355633 SLC13A5Q86YT5 568 aaPredicted RBP14.26□□□□□ -0.13
HOXA1-202ENST00000355633 RCOR2Q8IZ40 523 aa14.26□□□□□ -0.13
HOXA1-202ENST00000355633 FBXO22Q8NEZ5 403 aa14.26□□□□□ -0.13
HOXA1-202ENST00000355633 SPPL2BQ8TCT7 592 aa14.26□□□□□ -0.13
HOXA1-202ENST00000355633 FAM172AQ8WUF8 416 aa14.26□□□□□ -0.13
HOXA1-202ENST00000355633 ZWILCHQ9H900 591 aa14.26□□□□□ -0.13
HOXA1-202ENST00000355633 AAASQ9NRG9 546 aa14.26□□□□□ -0.13
HOXA1-202ENST00000355633 PCSK1NQ9UHG2 260 aa14.26□□□□□ -0.13
HOXA1-202ENST00000355633 ZMYND8Q9ULU4 1186 aaPredicted RBP14.26□□□□□ -0.13
HOXA1-202ENST00000355633 USP18Q9UMW8 372 aa14.26□□□□□ -0.13
HOXA1-202ENST00000355633 CDY1Q9Y6F8 540 aa14.26□□□□□ -0.13
HOXA1-202ENST00000355633 MTMR11A4FU01 709 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 TRIM66O15016 1216 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 RHOXF2BP0C7M4 288 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 NOS2P35228 1153 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 CETN2P41208 172 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 SLC5A3P53794 718 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 SMTNL2Q2TAL5 461 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 ADAT2Q7Z6V5 191 aaKnown RBP14.25□□□□□ -0.13
HOXA1-202ENST00000355633 SCML4Q8N228 414 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 FIBCD1Q8N539 461 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 GPR161Q8N6U8 529 aaKnown RBP14.25□□□□□ -0.13
HOXA1-202ENST00000355633 ATAD1Q8NBU5 361 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 IRGQQ8WZA9 623 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 HERVK_113Q902F9 699 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 RNF25Q96BH1 459 aaPredicted RBP14.25□□□□□ -0.13
HOXA1-202ENST00000355633 C8orf48Q96LL4 319 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 RHOXF2Q9BQY4 288 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 HERC2P3Q9BVR0 1158 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 EPC1Q9H2F5 836 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 POPDC2Q9HBU9 364 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 KLHL11Q9NVR0 708 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 INSL6Q9Y581 213 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 BACE2Q9Y5Z0 518 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 USP3Q9Y6I4 520 aa14.25□□□□□ -0.13
HOXA1-202ENST00000355633 GOLGA6L10A0A0M3HER8 536 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms