RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 AP4E1Q9UPM8 1137 aa18.64■□□□□ 0.57
COL18A1-202ENST00000355480 PCDHB12Q9Y5F1 795 aa18.64■□□□□ 0.57
COL18A1-202ENST00000355480 DEAF1O75398 565 aaPredicted RBP18.64■□□□□ 0.57
COL18A1-202ENST00000355480 CPA2P48052 419 aa18.64■□□□□ 0.57
COL18A1-202ENST00000355480 RUNX1T1Q06455 604 aa18.64■□□□□ 0.57
COL18A1-202ENST00000355480 FUT11Q495W5 492 aa18.64■□□□□ 0.57
COL18A1-202ENST00000355480 CNDP1Q96KN2 507 aa18.64■□□□□ 0.57
COL18A1-202ENST00000355480 AGO4Q9HCK5 861 aaKnown RBP18.64■□□□□ 0.57
COL18A1-202ENST00000355480 IARS2Q9NSE4 1012 aaKnown RBP18.64■□□□□ 0.57
COL18A1-202ENST00000355480 ALDH2P05091 517 aa18.64■□□□□ 0.57
COL18A1-202ENST00000355480 METTL7BQ6UX53 244 aa18.64■□□□□ 0.57
COL18A1-202ENST00000355480 RTFDC1Q9BY42 306 aaPredicted RBP18.64■□□□□ 0.57
COL18A1-202ENST00000355480 SETD4Q9NVD3 440 aa18.64■□□□□ 0.57
COL18A1-202ENST00000355480 CBX4O00257 560 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 GLRA3O75311 464 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 MYL4P12829 197 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 TCF3P15923 654 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 PLOD1Q02809 727 aaPredicted RBP18.63■□□□□ 0.57
COL18A1-202ENST00000355480 LRRC6Q86X45 466 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 MMGT1Q8N4V1 131 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 FBXO36Q8NEA4 188 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 IL17RAQ96F46 866 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 ZNF518BQ9C0D4 1074 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 BCORL1Q5H9F3 1711 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 A0A087X0T9 212 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 DDTLA6NHG4 134 aaPredicted RBP18.63■□□□□ 0.57
COL18A1-202ENST00000355480 UBXN8O00124 270 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 KPNA6O60684 536 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 FAM228BP0C875 321 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 GALNTL6Q49A17 601 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 Q4G0T1 1027 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 CCNJLQ8IV13 435 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 KCNB2Q92953 911 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 TMEM176AQ96HP8 235 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 PPP2R3BQ9Y5P8 575 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 RASSF10A6NK89 507 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 H3BRB1 525 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 NKRFO15226 690 aaKnown RBP eCLIP18.63■□□□□ 0.571e-6■■■□□ 16.1
COL18A1-202ENST00000355480 SERPINB8P50452 374 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 MYL6P60660 151 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 LAMTOR4Q0VGL1 99 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 FICDQ9BVA6 458 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 TUT1Q9H6E5 874 aaKnown RBP18.63■□□□□ 0.57
COL18A1-202ENST00000355480 CSDE1O75534 798 aaKnown RBP18.63■□□□□ 0.57
COL18A1-202ENST00000355480 OTUD4Q01804 1114 aaKnown RBP18.63■□□□□ 0.57
COL18A1-202ENST00000355480 MRPL28Q13084 256 aaKnown RBP18.63■□□□□ 0.57
COL18A1-202ENST00000355480 NDEL1Q9GZM8 345 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 MTFR1LQ9H019 292 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 EHD4Q9H223 541 aa18.63■□□□□ 0.57
COL18A1-202ENST00000355480 CKBP12277 381 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 CHI3L1P36222 383 aaPredicted RBP18.62■□□□□ 0.57
COL18A1-202ENST00000355480 ZNF333Q96JL9 665 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 SPATC1LQ9H0A9 340 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 PDGFCQ9NRA1 345 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 PLA2G4CQ9UP65 541 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 CYP24A1Q07973 514 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 MAPK7Q13164 816 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 SLC44A2Q8IWA5 706 aaPredicted RBP18.62■□□□□ 0.57
COL18A1-202ENST00000355480 SERPINB12Q96P63 405 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 APOL2Q9BQE5 337 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 LRRC40Q9H9A6 602 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 DCDC2Q9UHG0 476 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 ABCA6Q8N139 1617 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 CRTAMO95727 393 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 LSP1P33241 339 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 NUDT2P50583 147 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 ANXA11P50995 505 aaKnown RBP18.62■□□□□ 0.57
COL18A1-202ENST00000355480 ALDH6A1Q02252 535 aaKnown RBP18.62■□□□□ 0.57
COL18A1-202ENST00000355480 NSL1Q96IY1 281 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 CISHQ9NSE2 258 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 USP18Q9UMW8 372 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 MAP3K13O43283 966 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 TIMM44O43615 452 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 CXCL8P10145 99 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 TKTL1P51854 596 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 CXCL9Q07325 125 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 TMC2Q8TDI7 906 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 USE1Q9NZ43 259 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 MYO3AQ8NEV4 1616 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 PDHXO00330 501 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 POMCP01189 267 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 DNAJC3Q13217 504 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 LY6KQ17RY6 165 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 FBXO47Q5MNV8 452 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 ICE2Q659A1 982 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 OTOAQ7RTW8 1153 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 C4orf19Q8IY42 314 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 KIF2BQ8N4N8 673 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 ZNF614Q8N883 585 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 SYTL5Q8TDW5 730 aaPredicted RBP18.62■□□□□ 0.57
COL18A1-202ENST00000355480 PDCD2LQ9BRP1 358 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 NT5MQ9NPB1 228 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 DYRK1BQ9Y463 629 aa18.62■□□□□ 0.57
COL18A1-202ENST00000355480 hCG_2014768A0A024R1R8 64 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 TBKBP1A7MCY6 615 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 ACADMP11310 421 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 NFE2Q16621 373 aaPredicted RBP18.61■□□□□ 0.57
COL18A1-202ENST00000355480 NOA1Q8NC60 698 aaKnown RBP18.61■□□□□ 0.57
COL18A1-202ENST00000355480 IL25Q9H293 177 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 OSGEPL1Q9H4B0 414 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms