RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 USP45Q70EL2 814 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 PPP1R36Q96LQ0 422 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 PHACTR1Q9C0D0 580 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 REXO4Q9GZR2 422 aaKnown RBP5.32□□□□□ -1.56
CKAP5-202ENST00000354558 NKX2-4Q9H2Z4 354 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 SMARCAL1Q9NZC9 954 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 CLIC4Q9Y696 253 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 WDR97A6NE52 1622 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 NCF1BA6NI72 391 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-202ENST00000354558 SNTNA6NMZ2 147 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 NCF1CA8MVU1 366 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-202ENST00000354558 B2RBV5 119 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 IRF6O14896 467 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 NCF1P14598 390 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-202ENST00000354558 CYP2A7P20853 494 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 PER3P56645 1201 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 C1QTNF8P60827 252 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 PLA2G4EQ3MJ16 856 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 HSP90AA5PQ58FG0 334 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 LVRNQ6Q4G3 990 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 TTC17Q96AE7 1141 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 C18orf8Q96DM3 657 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 EIF2AQ9BY44 585 aaKnown RBP5.32□□□□□ -1.56
CKAP5-202ENST00000354558 USP44Q9H0E7 712 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 EPN3Q9H201 632 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 TAF1DQ9H5J8 278 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-202ENST00000354558 RNF121Q9H920 327 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 CCDC177Q9NQR7 707 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-202ENST00000354558 DBNLQ9UJU6 430 aaKnown RBP5.32□□□□□ -1.56
CKAP5-202ENST00000354558 EXOC1LA0A1B0GW35 172 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 SOWAHDA6NJG2 315 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 FAM227AF5H4B4 570 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 CLEC3AO75596 197 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 CCNYL3P0C7X3 344 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 ITGB6P18564 788 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 CSTF2P33240 577 aaKnown RBP eCLIP5.32□□□□□ -1.56
CKAP5-202ENST00000354558 HNF1BP35680 557 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 EIF4A3P38919 411 aaKnown RBP5.32□□□□□ -1.56
CKAP5-202ENST00000354558 PTPN9P43378 593 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 CPA2P48052 419 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 GLUD2P49448 558 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 PFKPQ01813 784 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 BCL2L1Q07817 233 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 RGS1Q08116 209 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 SPIDRQ14159 915 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 DET1Q7L5Y6 550 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 CLEC10AQ8IUN9 316 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 DENND6AQ8IWF6 608 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 IL22RA1Q8N6P7 574 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 Q8N9G6 341 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-202ENST00000354558 ADCY4Q8NFM4 1077 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 OR8K1Q8NGG5 319 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 KCNB2Q92953 911 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 DEPDC7Q96QD5 511 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 MIEF1Q9NQG6 463 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 NYAP2Q9P242 653 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 SCOCQ9UIL1 159 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 OR10H1Q9Y4A9 318 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 PTPRJQ12913 1337 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 C1orf167Q5SNV9 1468 aa5.32□□□□□ -1.56
CKAP5-202ENST00000354558 NPHP3-ACAD11A0A0J9YXS1 232 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 GNG14A0A1W2PPG7 69 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 NT5C1B-RDH14C9J2C7 533 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 GTPBP1O00178 669 aaKnown RBP5.31□□□□□ -1.56
CKAP5-202ENST00000354558 KERAO60938 352 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 FKBP9O95302 570 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 FGRP09769 529 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 PDGFRAP16234 1089 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 POU1F1P28069 291 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 GABRR2P28476 465 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 NTSP30990 170 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 TLX1P31314 330 aaPredicted RBP5.31□□□□□ -1.56
CKAP5-202ENST00000354558 NRIP1P48552 1158 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 PRIM2P49643 509 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 POU4F1Q01851 419 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 PRKCZQ05513 592 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 TBL3Q12788 808 aaKnown RBP5.31□□□□□ -1.56
CKAP5-202ENST00000354558 IFT88Q13099 833 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 BIKQ13323 160 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 MORF4L2Q15014 288 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 KCNA10Q16322 511 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 PGS1Q32NB8 556 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 NUGGCQ68CJ6 796 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 FKBP9P1Q75LS8 142 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 CD302Q8IX05 232 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 MAGEC3Q8TD91 643 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 COG1Q8WTW3 980 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 SERPINI1Q99574 410 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 CCT7Q99832 543 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 FDXACB1Q9BRP7 624 aaPredicted RBP5.31□□□□□ -1.56
CKAP5-202ENST00000354558 MLPHQ9BV36 600 aaPredicted RBP5.31□□□□□ -1.56
CKAP5-202ENST00000354558 ATP13A1Q9HD20 1204 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 SAYSD1Q9NPB0 183 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.31□□□□□ -1.56
CKAP5-202ENST00000354558 KIAA1468Q9P260 1216 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 VPS9D1Q9Y2B5 631 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 SLC27A6Q9Y2P4 619 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 NEDD4P46934 1319 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 KDM4FA0A1W2PPD8 638 aa5.31□□□□□ -1.56
CKAP5-202ENST00000354558 ISM1B1AKI9 464 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms