RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 DMAC2Q9NW81 257 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 ARMCX3Q9UH62 379 aaPredicted RBP12.24□□□□□ -0.45
CDRT1-202ENST00000354433 FBXO4Q9UKT5 387 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 TRAV19A0A0A6YYK7 116 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 TRIM66O15016 1216 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 TADA3O75528 432 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 TRIM21P19474 475 aaKnown RBP12.23□□□□□ -0.45
CDRT1-202ENST00000354433 WEE1P30291 646 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 PSMC2P35998 433 aaKnown RBP12.23□□□□□ -0.45
CDRT1-202ENST00000354433 MAGEA11P43364 429 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 TERF1P54274 439 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 GOLGA8FQ08AF8 430 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 GOLGA8DPQ0D2H9 430 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 NCOA4Q13772 614 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 DNTTIP2Q5QJE6 756 aaKnown RBP12.23□□□□□ -0.45
CDRT1-202ENST00000354433 TRIM68Q6AZZ1 485 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 DENND5BQ6ZUT9 1274 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 NYAP1Q6ZVC0 841 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 MON1AQ86VX9 555 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 RALGPS2Q86X27 583 aaPredicted RBP12.23□□□□□ -0.45
CDRT1-202ENST00000354433 PLEKHO2Q8TD55 490 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 PARD3BQ8TEW8 1205 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 ATRIPQ8WXE1 791 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 ZNF516Q92618 1163 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 USP13Q92995 863 aaPredicted RBP12.23□□□□□ -0.45
CDRT1-202ENST00000354433 DPEP3Q9H4B8 488 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 SMYD3Q9H7B4 428 aa12.23□□□□□ -0.45
CDRT1-202ENST00000354433 COL4A2P08572 1712 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 F8VP50 259 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 MAPK13O15264 365 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 STAU1O95793 577 aaKnown RBP12.22□□□□□ -0.45
CDRT1-202ENST00000354433 ABL1P00519 1130 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 P4HA1P13674 534 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 PIK3CAP42336 1068 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 RAP1GAPP47736 663 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 CCR3P51677 355 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 CDK17Q00537 523 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 PON2Q15165 354 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 ITPRIPL2Q3MIP1 535 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 ZNF528Q3MIS6 628 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 TXNDC11Q6PKC3 985 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 LIMS2Q7Z4I7 341 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 B3GALNT2Q8NCR0 500 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 ELMO3Q96BJ8 720 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 PPP1R13BQ96KQ4 1090 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 MYRFLQ96LU7 910 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 PCMTD1Q96MG8 357 aaPredicted RBP12.22□□□□□ -0.45
CDRT1-202ENST00000354433 IER2Q9BTL4 223 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 MED10Q9BTT4 135 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 ELOVL4Q9GZR5 314 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 XYLT2Q9H1B5 865 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 EBF3Q9H4W6 596 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 MMRN2Q9H8L6 949 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 GKN1Q9NS71 199 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 RBM12Q9NTZ6 932 aaKnown RBP12.22□□□□□ -0.45
CDRT1-202ENST00000354433 EHD2Q9NZN4 543 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 NUP210Q8TEM1 1887 aaPredicted RBP12.22□□□□□ -0.45
CDRT1-202ENST00000354433 VPS13AQ96RL7 3174 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 GTPBP10A4D1E9 387 aaKnown RBP12.22□□□□□ -0.45
CDRT1-202ENST00000354433 AKAP3O75969 853 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 AFPP02771 609 aaKnown RBP12.22□□□□□ -0.45
CDRT1-202ENST00000354433 USP17L7P0C7H9 530 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 CHRNB1P11230 501 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 PTPN1P18031 435 aaKnown RBP12.22□□□□□ -0.45
CDRT1-202ENST00000354433 HNRNPH3P31942 346 aaKnown RBP12.22□□□□□ -0.45
CDRT1-202ENST00000354433 MLLT6P55198 1093 aaPredicted RBP12.22□□□□□ -0.45
CDRT1-202ENST00000354433 CDH8P55286 799 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 MCCD1P59942 119 aaPredicted RBP12.22□□□□□ -0.45
CDRT1-202ENST00000354433 DLG4P78352 724 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 FZD5Q13467 585 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 MTF1Q14872 753 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 MEA1Q16626 185 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 Q6ZS52 159 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 ARL14EPQ8N8R7 260 aaPredicted RBP12.22□□□□□ -0.45
CDRT1-202ENST00000354433 SPATA17Q96L03 361 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 IMPG2Q9BZV3 1241 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 ZNF518BQ9C0D4 1074 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 NUCKS1Q9H1E3 243 aaKnown RBP12.22□□□□□ -0.45
CDRT1-202ENST00000354433 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.22□□□□□ -0.45
CDRT1-202ENST00000354433 PRMT8Q9NR22 394 aaPredicted RBP12.22□□□□□ -0.45
CDRT1-202ENST00000354433 TRPM5Q9NZQ8 1165 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 PPP2R2CQ9Y2T4 447 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 NME7Q9Y5B8 376 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 PCDHGA2Q9Y5H1 932 aa12.22□□□□□ -0.45
CDRT1-202ENST00000354433 ATP8B3O60423 1300 aa12.21□□□□□ -0.45
CDRT1-202ENST00000354433 C2orf78A6NCI8 922 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 USP27XA6NNY8 438 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 SOBPA7XYQ1 873 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 RNF225M0QZC1 329 aaPredicted RBP12.21□□□□□ -0.46
CDRT1-202ENST00000354433 CLDN5O00501 218 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 C4BPAP04003 597 aaKnown RBP12.21□□□□□ -0.46
CDRT1-202ENST00000354433 CCDC175P0C221 793 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 KRT13P13646 458 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 IFNAR2P48551 515 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 PDE6CP51160 858 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 KCNMA1Q12791 1236 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 KCNH2Q12809 1159 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 RUNX3Q13761 415 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 FAM186BQ8IYM0 893 aa12.21□□□□□ -0.46
CDRT1-202ENST00000354433 ZNF687Q8N1G0 1237 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms