RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 FOSP01100 380 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-201ENST00000352993 SLC5A2P31639 672 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 PSMC5P62195 406 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 RPL7AP62424 266 aaKnown RBP7.93□□□□□ -1.14
BRCA1-201ENST00000352993 OTUD4Q01804 1114 aaKnown RBP7.93□□□□□ -1.14
BRCA1-201ENST00000352993 SULT2A1Q06520 285 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 TBCCQ15814 346 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 PPP6R3Q5H9R7 873 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-201ENST00000352993 ITPRIPL1Q6GPH6 555 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 ZBTB46Q86UZ6 589 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 NUP93Q8N1F7 819 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 FAM71DQ8N9W8 422 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 ACTL9Q8TC94 416 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 FNDC8Q8TC99 324 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 DDI1Q8WTU0 396 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 SLITRK1Q96PX8 696 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 CCDC106Q9BWC9 280 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 TSPYL2Q9H2G4 693 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-201ENST00000352993 XAB2Q9HCS7 855 aaKnown RBP7.93□□□□□ -1.14
BRCA1-201ENST00000352993 TUFT1Q9NNX1 390 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 SELENONQ9NZV5 590 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 WDR37Q9Y2I8 494 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 TELO2Q9Y4R8 837 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 UBE4BO95155 1302 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 TCRBV9S1A1TA0A576 114 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 FOXD2O60548 495 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-201ENST00000352993 KLHL2O95198 593 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 SNRPAP09012 282 aaKnown RBP7.93□□□□□ -1.14
BRCA1-201ENST00000352993 PDGFRBP09619 1106 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 TNNI1P19237 187 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 GJA8P48165 433 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 TMED10P49755 219 aaKnown RBP7.93□□□□□ -1.14
BRCA1-201ENST00000352993 ENTPD1P49961 510 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 PRELPP51888 382 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 STAT2P52630 851 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 NRLP54845 237 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 NR1H2P55055 460 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 GDF10P55107 478 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 XIAPP98170 497 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 PSMD6Q15008 389 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 NFIL3Q16649 462 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 MFSD4BQ5TF39 518 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 TTC39BQ5VTQ0 682 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-201ENST00000352993 KRT80Q6KB66 452 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 TMEM270Q6UE05 265 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 SLF2Q8IX21 1173 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 RTKN2Q8IZC4 609 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 PQLC1Q8N2U9 271 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 HELQQ8TDG4 1101 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 PPP4R1Q8TF05 950 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 DIS3LQ8TF46 1054 aaKnown RBP7.93□□□□□ -1.14
BRCA1-201ENST00000352993 CPT1BQ92523 772 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 LENG9Q96B70 501 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 PPP1R36Q96LQ0 422 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 BTBD9Q96Q07 612 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 HSD17B14Q9BPX1 270 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 ZNF577Q9BSK1 485 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 NYXQ9GZU5 481 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 PAIP1Q9H074 479 aaKnown RBP7.93□□□□□ -1.14
BRCA1-201ENST00000352993 AVENQ9NQS1 362 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-201ENST00000352993 RSL24D1Q9UHA3 163 aaKnown RBP7.93□□□□□ -1.14
BRCA1-201ENST00000352993 GNEQ9Y223 722 aaKnown RBP7.93□□□□□ -1.14
BRCA1-201ENST00000352993 TSC22D4Q9Y3Q8 395 aa7.93□□□□□ -1.14
BRCA1-201ENST00000352993 F8VP50 259 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 TPD52L2O43399 206 aaKnown RBP7.92□□□□□ -1.14
BRCA1-201ENST00000352993 CST8O60676 142 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 AVILO75366 819 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 ATP1A4Q13733 1029 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 BRDTQ58F21 947 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-201ENST00000352993 KCNT1Q5JUK3 1230 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 FAM102BQ5T8I3 360 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 OLFML1Q6UWY5 402 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 ADGRG6Q86SQ4 1221 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 TRIM50Q86XT4 487 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 LARGE2Q8N3Y3 721 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 SMYD1Q8NB12 490 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 FEZF2Q8TBJ5 459 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 MCEEQ96PE7 176 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 KIFC3Q9BVG8 833 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 NUF2Q9BZD4 464 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 IP6K2Q9UHH9 426 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 TBC1D30Q9Y2I9 924 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 HBS1LQ9Y450 684 aaKnown RBP7.92□□□□□ -1.14
BRCA1-201ENST00000352993 COL4A1P02462 1669 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 PLSCR1O15162 318 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 DNAJA2O60884 412 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 E2F6O75461 281 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 DGKIO75912 1065 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 UFL1O94874 794 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 HLA-DOAP06340 250 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 CFHP08603 1231 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 SNHG28P0DPA3 235 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 TCN1P20061 433 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-201ENST00000352993 VARSP26640 1264 aaKnown RBP7.92□□□□□ -1.14
BRCA1-201ENST00000352993 RPL22P35268 128 aaKnown RBP7.92□□□□□ -1.14
BRCA1-201ENST00000352993 ETV4P43268 484 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 RPL10AP62906 217 aaKnown RBP7.92□□□□□ -1.14
BRCA1-201ENST00000352993 MAMLD1Q13495 774 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 ITPK1Q13572 414 aa7.92□□□□□ -1.14
BRCA1-201ENST00000352993 SEPT6Q14141 434 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms