RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 PCDHB7Q9Y5E2 793 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 SCINQ9Y6U3 715 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 TCRBV5S1A1TA0A578 114 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 TLDC2A0PJX2 215 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 PYGMP11217 842 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 TCF4P15884 667 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 WARSP23381 471 aaKnown RBP14.06□□□□□ -0.16
UBA3-201ENST00000349511 RFC1P35251 1148 aaPredicted RBP14.06□□□□□ -0.16
UBA3-201ENST00000349511 GJA8P48165 433 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 MNAT1P51948 309 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 SLC29A2Q14542 456 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 LRRC26Q2I0M4 334 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 MDH1BQ5I0G3 518 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 CCDC137Q6PK04 289 aaKnown RBP14.06□□□□□ -0.16
UBA3-201ENST00000349511 CPLX4Q7Z7G2 160 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 SCUBE3Q8IX30 993 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 CRYBG2Q8N1P7 616 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 CENPTQ96BT3 561 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 B3GNT5Q9BYG0 378 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 SEZ6LQ9BYH1 1024 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 MIS12Q9H081 205 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 ACTR5Q9H9F9 607 aaPredicted RBP14.06□□□□□ -0.16
UBA3-201ENST00000349511 PRDM5Q9NQX1 630 aaPredicted RBP14.06□□□□□ -0.16
UBA3-201ENST00000349511 PCDHA3Q9Y5H8 950 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 GOLGA6L7A0A1B0GV03 622 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.05□□□□□ -0.16
UBA3-201ENST00000349511 F8VP50 259 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 KRT3P12035 628 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 COL6A1P12109 1028 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 CHN1P15882 459 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 PTPN1P18031 435 aaKnown RBP14.05□□□□□ -0.16
UBA3-201ENST00000349511 PBX3P40426 434 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 BCAR1P56945 870 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 SPRED3Q2MJR0 410 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 SWT1Q5T5J6 900 aaKnown RBP14.05□□□□□ -0.16
UBA3-201ENST00000349511 UBAP2Q5T6F2 1119 aaKnown RBP14.05□□□□□ -0.16
UBA3-201ENST00000349511 OR6B2Q6IFH4 312 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 ABI1Q8IZP0 508 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 CD101Q93033 1021 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 PGM2Q96G03 612 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 TNIP3Q96KP6 325 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 FAM129AQ9BZQ8 928 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 SEMA4AQ9H3S1 761 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 TMEM161AQ9NX61 479 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 LRFN2Q9ULH4 789 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 TCRBV7S2A1N4TA0A589 114 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 MYBPHLA2RUH7 354 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 TMEM191CA6NGB0 347 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 SMIM23A6NLE4 172 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 GABRDO14764 452 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 BEST1O76090 585 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 ITGB8P26012 769 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 ZNF252P-AS1Q0IIN9 211 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 TAF5Q15542 800 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 PKDCCQ504Y2 493 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 FAM102AQ5T9C2 384 aaPredicted RBP14.05□□□□□ -0.16
UBA3-201ENST00000349511 GKAP1Q5VSY0 366 aaPredicted RBP14.05□□□□□ -0.16
UBA3-201ENST00000349511 PPP1R2P3Q6NXS1 205 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 FAM183BPQ6ZVS7 135 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 TMCO2Q7Z6W1 182 aaPredicted RBP14.05□□□□□ -0.16
UBA3-201ENST00000349511 URGCPQ8TCY9 931 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 SLC35F5Q8WV83 523 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 ARMC5Q96C12 935 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 CHMP6Q96FZ7 201 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 SELENOSQ9BQE4 189 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 MED10Q9BTT4 135 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 FAM124BQ9H5Z6 455 aaPredicted RBP14.05□□□□□ -0.16
UBA3-201ENST00000349511 CRTAC1Q9NQ79 661 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 MTRF1LQ9UGC7 380 aaKnown RBP14.05□□□□□ -0.16
UBA3-201ENST00000349511 STRIP2Q9ULQ0 834 aa14.05□□□□□ -0.16
UBA3-201ENST00000349511 TTC3P53804 2025 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 NT5C1B-RDH14C9J2C7 533 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 GABBR2O75899 941 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 PROSCO94903 275 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 LCP1P13796 627 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 GBP1P32455 592 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 COILP38432 576 aaPredicted RBP14.04□□□□□ -0.16
UBA3-201ENST00000349511 TAS2R40P59535 323 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 IFI35P80217 286 aaPredicted RBP14.04□□□□□ -0.16
UBA3-201ENST00000349511 ATP13A4Q4VNC1 1196 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 ANKRD20A8PQ5CZ79 823 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.04□□□□□ -0.16
UBA3-201ENST00000349511 FUKQ8N0W3 1084 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 UHMK1Q8TAS1 419 aaKnown RBP14.04□□□□□ -0.16
UBA3-201ENST00000349511 CLEC4CQ8WTT0 213 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 RSPH1Q8WYR4 309 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 DDX27Q96GQ7 796 aaKnown RBP14.04□□□□□ -0.16
UBA3-201ENST00000349511 CCDC114Q96M63 670 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 FAM193BQ96PV7 902 aaPredicted RBP14.04□□□□□ -0.16
UBA3-201ENST00000349511 TMEM209Q96SK2 561 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 SYT15Q9BQS2 421 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 RHOBTB2Q9BYZ6 727 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 ADAM7Q9H2U9 754 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 C11orf49Q9H6J7 331 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 KLHL11Q9NVR0 708 aa14.04□□□□□ -0.16
UBA3-201ENST00000349511 RGS16O15492 202 aaPredicted RBP14.03□□□□□ -0.16
UBA3-201ENST00000349511 RASSF9O75901 435 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 ODC1P11926 461 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 MMP13P45452 471 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 STILQ15468 1287 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms