RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 ERI1Q8IV48 349 aaKnown RBP10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 C4orf19Q8IY42 314 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 PYROXD1Q8WU10 500 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 BIRC8Q96P09 236 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 GRIP2Q9C0E4 1043 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 RMI1Q9H9A7 625 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 PCDH9Q9HC56 1237 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 ANKEF1Q9NU02 776 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 MAP3K20Q9NYL2 800 aaKnown RBP10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 DNPEPQ9ULA0 475 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 FARP1Q9Y4F1 1045 aaPredicted RBP10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 DTNAQ9Y4J8 743 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 MAD1L1Q9Y6D9 718 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 AK5Q9Y6K8 562 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 SCINQ9Y6U3 715 aa10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 SF3B1O75533 1304 aaKnown RBP eCLIP10.75□□□□□ -0.69
CHRNA1-202ENST00000348749 E7ESA3 106 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 DNAJA2O60884 412 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 CBFA2T3O75081 653 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 PDE5AO76074 875 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 GH2P01242 217 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 ADRB2P07550 413 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 PMLP29590 882 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 SSTR1P30872 391 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 HSD17B4P51659 736 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 HIRAP54198 1017 aaPredicted RBP10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 NR1H2P55055 460 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 PDCD4Q53EL6 469 aaKnown RBP10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 ATG16L1Q676U5 607 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 PATL1Q86TB9 770 aaKnown RBP10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 TMEM126BQ8IUX1 230 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 ANKMY2Q8IV38 441 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 RTKN2Q8IZC4 609 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 RAB3IL1Q8TBN0 382 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 ACTRT2Q8TDY3 377 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 SPIRE2Q8WWL2 714 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 SEMA4DQ92854 862 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 HSPBAP1Q96EW2 488 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 DCUN1D1Q96GG9 259 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 KLF6Q99612 283 aaPredicted RBP10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 CORO1BQ9BR76 489 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 TBC1D22BQ9NU19 505 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 PPP1R1BQ9UD71 204 aaPredicted RBP10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 CEPT1Q9Y6K0 416 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 ZHX2Q9Y6X8 837 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 ARHGAP42A6NI28 874 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 SPDYE16A6NNV3 312 aaPredicted RBP10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 H3BNX3 289 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 GDF11O95390 407 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 CDH2P19022 906 aaPredicted RBP10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 GARTP22102 1010 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 PTPN7P35236 360 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 GJA8P48165 433 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 TAS2R40P59535 323 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 ZNF200P98182 395 aaPredicted RBP10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 TCP10Q12799 353 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 KBTBD12Q3ZCT8 623 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 LRRC38Q5VT99 294 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 TTC13Q8NBP0 860 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 RDM1Q8NG50 284 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 SERAC1Q96JX3 654 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 GCNAQ96QF7 691 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 MPHOSPH6Q99547 160 aaKnown RBP10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 NTPCRQ9BSD7 190 aaKnown RBP10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 BRD8Q9H0E9 1235 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 PLGRKTQ9HBL7 147 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 UBAP1Q9NZ09 502 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 C6orf203Q9P0P8 240 aaPredicted RBP10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 ITGA11Q9UKX5 1188 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 TBX20Q9UMR3 447 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 SNCAIPQ9Y6H5 919 aa10.74□□□□□ -0.69
CHRNA1-202ENST00000348749 SMCHD1A6NHR9 2005 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 ASTN2O75129 1339 aaPredicted RBP10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 MYPNQ86TC9 1320 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 SDR42E2A6NKP2 422 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 H0YCG3 227 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 BOLA2-SMG1P6H3BVE0 249 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 DHX15O43143 795 aaKnown RBP10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 ALDH2P05091 517 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 ITGAVP06756 1048 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 ETS1P14921 441 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 RAG1P15918 1043 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 NSFP46459 744 aaKnown RBP10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 ALDH1A3P47895 512 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 JAK3P52333 1124 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 VCPP55072 806 aaKnown RBP10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 MTTPP55157 894 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 MYBPC1Q00872 1141 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 CYP24A1Q07973 514 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 NFX1Q12986 1120 aaKnown RBP10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 OASLQ15646 514 aaKnown RBP10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 DOK7Q18PE1 504 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 SHROOM1Q2M3G4 852 aaPredicted RBP10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 GRAMD1BQ3KR37 738 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 TEX44Q53QW1 395 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 SLC27A3Q5K4L6 730 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 PACS1Q6VY07 963 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 MON1BQ7L1V2 547 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 ARID3BQ8IVW6 561 aaPredicted RBP10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 RCOR2Q8IZ40 523 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms