RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 MRPS5P82675 430 aaKnown RBP28.45■■■□□ 2.14
SSBP4-202ENST00000348495 SLC26A9Q7LBE3 791 aa28.45■■■□□ 2.14
SSBP4-202ENST00000348495 NUP93Q8N1F7 819 aa28.45■■■□□ 2.14
SSBP4-202ENST00000348495 ZNF564Q8TBZ8 553 aaPredicted RBP28.45■■■□□ 2.14
SSBP4-202ENST00000348495 TRANK1O15050 2925 aa28.45■■■□□ 2.14
SSBP4-202ENST00000348495 ZBED1O96006 694 aa28.44■■■□□ 2.14
SSBP4-202ENST00000348495 GLUD1P00367 558 aa28.44■■■□□ 2.14
SSBP4-202ENST00000348495 FAM102AQ5T9C2 384 aaPredicted RBP28.44■■■□□ 2.14
SSBP4-202ENST00000348495 BHLHA9Q7RTU4 235 aa28.44■■■□□ 2.14
SSBP4-202ENST00000348495 CALR3Q96L12 384 aaKnown RBP28.44■■■□□ 2.14
SSBP4-202ENST00000348495 TMEM59LQ9UK28 342 aa28.44■■■□□ 2.14
SSBP4-202ENST00000348495 INSL5Q9Y5Q6 135 aa28.44■■■□□ 2.14
SSBP4-202ENST00000348495 PRRG1O14668 218 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 CLASP2O75122 1294 aaKnown RBP28.43■■■□□ 2.14
SSBP4-202ENST00000348495 SPATA31D3P0C874 917 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 KRT3P12035 628 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 ELF1P32519 619 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 NOP2P46087 812 aaKnown RBP28.43■■■□□ 2.14
SSBP4-202ENST00000348495 DAOAP59103 153 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 RPL7AP62424 266 aaKnown RBP28.43■■■□□ 2.14
SSBP4-202ENST00000348495 TAF5Q15542 800 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 SPATA31D4Q6ZUB0 917 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 NYAP1Q6ZVC0 841 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 STKLD1Q8NE28 680 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 TPCN2Q8NHX9 752 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 FEZF2Q8TBJ5 459 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 GPR152Q8TDT2 470 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 SELENOOQ9BVL4 669 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 METTL5Q9NRN9 209 aaKnown RBP28.43■■■□□ 2.14
SSBP4-202ENST00000348495 GREB1Q4ZG55 1949 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 FAM92AA1XBS5 289 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 TMEM191CA6NGB0 347 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 RFXAPO00287 272 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 MOCS3O95396 460 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 USP17L7P0C7H9 530 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 USP46P62068 366 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 DENND5BQ6ZUT9 1274 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 NDRG1Q92597 394 aaKnown RBP28.43■■■□□ 2.14
SSBP4-202ENST00000348495 TRIM7Q9C029 511 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 ZNF576Q9H609 170 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 COMMD8Q9NX08 183 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 CAPN6Q9Y6Q1 641 aa28.43■■■□□ 2.14
SSBP4-202ENST00000348495 ARCQ7LC44 396 aa28.42■■■□□ 2.14
SSBP4-202ENST00000348495 KREMEN2Q8NCW0 462 aa28.42■■■□□ 2.14
SSBP4-202ENST00000348495 SLC22A17Q8WUG5 538 aa28.42■■■□□ 2.14
SSBP4-202ENST00000348495 IRGQQ8WZA9 623 aa28.42■■■□□ 2.14
SSBP4-202ENST00000348495 MCEEQ96PE7 176 aa28.42■■■□□ 2.14
SSBP4-202ENST00000348495 ASNSD1Q9NWL6 643 aa28.42■■■□□ 2.14
SSBP4-202ENST00000348495 SART1O43290 800 aaKnown RBP28.41■■■□□ 2.14
SSBP4-202ENST00000348495 ZNF500O60304 480 aaPredicted RBP28.41■■■□□ 2.14
SSBP4-202ENST00000348495 RFC1P35251 1148 aaPredicted RBP28.41■■■□□ 2.14
SSBP4-202ENST00000348495 EFHC1Q5JVL4 640 aa28.41■■■□□ 2.14
SSBP4-202ENST00000348495 JOSD2Q8TAC2 188 aa28.41■■■□□ 2.14
SSBP4-202ENST00000348495 GIPC2Q8TF65 315 aa28.41■■■□□ 2.14
SSBP4-202ENST00000348495 MRPL38Q96DV4 380 aaKnown RBP28.41■■■□□ 2.14
SSBP4-202ENST00000348495 FBXO44Q9H4M3 255 aa28.41■■■□□ 2.14
SSBP4-202ENST00000348495 SCML2Q9UQR0 700 aa28.41■■■□□ 2.14
SSBP4-202ENST00000348495 SLC38A8A6NNN8 435 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 RTN3O95197 1032 aaPredicted RBP28.4■■■□□ 2.14
SSBP4-202ENST00000348495 GLI1P08151 1106 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 ALDH1A3P47895 512 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 NAP1L1P55209 391 aaKnown RBP28.4■■■□□ 2.14
SSBP4-202ENST00000348495 IFI16Q16666 785 aaKnown RBP28.4■■■□□ 2.14
SSBP4-202ENST00000348495 DCUN1D2Q6PH85 259 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 CCDC149Q6ZUS6 474 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 ADGRD2Q7Z7M1 963 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 LRRC57Q8N9N7 239 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 SLC7A14Q8TBB6 771 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 TTLL2Q9BWV7 592 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 ANAPC7Q9UJX3 599 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 MTCL1Q9Y4B5 1905 aaKnown RBP28.4■■■□□ 2.14
SSBP4-202ENST00000348495 GRID2IPA4D2P6 1211 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 YJEFN3A6XGL0 299 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 E7ENQ6 273 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 KIF5CO60282 957 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 TWF1Q12792 350 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 MTMR3Q13615 1198 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 TRNP1Q6NT89 227 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 RTL10Q7L3V2 364 aa28.4■■■□□ 2.14
SSBP4-202ENST00000348495 TRIOBPQ9H2D6 2365 aa28.39■■■□□ 2.14
SSBP4-202ENST00000348495 BUB1BO60566 1050 aaPredicted RBP28.39■■■□□ 2.14
SSBP4-202ENST00000348495 HSF2BPO75031 334 aa28.39■■■□□ 2.14
SSBP4-202ENST00000348495 GRAP2O75791 330 aa28.39■■■□□ 2.14
SSBP4-202ENST00000348495 OGDHQ02218 1023 aa28.39■■■□□ 2.14
SSBP4-202ENST00000348495 PTPROQ16827 1216 aa28.39■■■□□ 2.14
SSBP4-202ENST00000348495 EMC1Q8N766 993 aa28.39■■■□□ 2.14
SSBP4-202ENST00000348495 FNIP1Q8TF40 1166 aa28.39■■■□□ 2.14
SSBP4-202ENST00000348495 BTBD6Q96KE9 485 aa28.39■■■□□ 2.14
SSBP4-202ENST00000348495 TMEM265A0A087WTH1 108 aa28.38■■■□□ 2.13
SSBP4-202ENST00000348495 C2CD4BA6NLJ0 364 aa28.38■■■□□ 2.13
SSBP4-202ENST00000348495 PER2O15055 1255 aa28.38■■■□□ 2.13
SSBP4-202ENST00000348495 C8AP07357 584 aa28.38■■■□□ 2.13
SSBP4-202ENST00000348495 HMGA1P17096 107 aaKnown RBP28.38■■■□□ 2.13
SSBP4-202ENST00000348495 YWHAQP27348 245 aa28.38■■■□□ 2.13
SSBP4-202ENST00000348495 FLT3P36888 993 aa28.38■■■□□ 2.13
SSBP4-202ENST00000348495 YWHAZP63104 245 aaKnown RBP28.38■■■□□ 2.13
SSBP4-202ENST00000348495 ZNF252P-AS1Q0IIN9 211 aa28.38■■■□□ 2.13
SSBP4-202ENST00000348495 PLD1Q13393 1074 aa28.38■■■□□ 2.13
SSBP4-202ENST00000348495 DUSP6Q16828 381 aa28.38■■■□□ 2.13
SSBP4-202ENST00000348495 HFE2Q6ZVN8 426 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms