RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 NRLP54845 237 aa22.28■■□□□ 1.16
TRIM3-201ENST00000345851 RALGPS1Q5JS13 557 aa22.28■■□□□ 1.16
TRIM3-201ENST00000345851 EFCAB3Q8N7B9 438 aa22.28■■□□□ 1.16
TRIM3-201ENST00000345851 TEKT3Q9BXF9 490 aa22.28■■□□□ 1.16
TRIM3-201ENST00000345851 KLHL4Q9C0H6 718 aa22.28■■□□□ 1.16
TRIM3-201ENST00000345851 MRPL47Q9HD33 250 aaKnown RBP22.28■■□□□ 1.16
TRIM3-201ENST00000345851 C1orf112Q9NSG2 853 aa22.28■■□□□ 1.16
TRIM3-201ENST00000345851 CNTN3Q9P232 1028 aa22.28■■□□□ 1.16
TRIM3-201ENST00000345851 F8VP50 259 aa22.28■■□□□ 1.16
TRIM3-201ENST00000345851 WDR46O15213 610 aaKnown RBP22.28■■□□□ 1.16
TRIM3-201ENST00000345851 STIP1P31948 543 aaKnown RBP22.28■■□□□ 1.16
TRIM3-201ENST00000345851 PSMC5P62195 406 aa22.28■■□□□ 1.16
TRIM3-201ENST00000345851 GRAMD1BQ3KR37 738 aa22.28■■□□□ 1.16
TRIM3-201ENST00000345851 EFHC1Q5JVL4 640 aa22.28■■□□□ 1.16
TRIM3-201ENST00000345851 FAM91A1Q658Y4 838 aa22.28■■□□□ 1.16
TRIM3-201ENST00000345851 FBXL19Q6PCT2 694 aa22.28■■□□□ 1.16
TRIM3-201ENST00000345851 PPIL6Q8IXY8 311 aa22.28■■□□□ 1.16
TRIM3-201ENST00000345851 WWP1Q9H0M0 922 aa22.28■■□□□ 1.16
TRIM3-201ENST00000345851 IPO5O00410 1097 aaKnown RBP22.27■■□□□ 1.16
TRIM3-201ENST00000345851 PMM2O15305 246 aa22.27■■□□□ 1.16
TRIM3-201ENST00000345851 SERPINB6P35237 376 aa22.27■■□□□ 1.16
TRIM3-201ENST00000345851 CHI3L2Q15782 390 aa22.27■■□□□ 1.16
TRIM3-201ENST00000345851 TAAR1Q96RJ0 339 aa22.27■■□□□ 1.16
TRIM3-201ENST00000345851 SLC13A1Q9BZW2 595 aa22.27■■□□□ 1.16
TRIM3-201ENST00000345851 CYP4F11Q9HBI6 524 aa22.27■■□□□ 1.16
TRIM3-201ENST00000345851 CTDP1Q9Y5B0 961 aaPredicted RBP22.27■■□□□ 1.16
TRIM3-201ENST00000345851 SNCAIPQ9Y6H5 919 aa22.27■■□□□ 1.16
TRIM3-201ENST00000345851 SMIM31A0A1B0GVY4 71 aa22.27■■□□□ 1.16
TRIM3-201ENST00000345851 MYCLP12524 364 aaPredicted RBP22.27■■□□□ 1.16
TRIM3-201ENST00000345851 DRICH1Q6PGQ1 229 aaPredicted RBP22.27■■□□□ 1.16
TRIM3-201ENST00000345851 GCNAQ96QF7 691 aa22.27■■□□□ 1.16
TRIM3-201ENST00000345851 DRG1Q9Y295 367 aaKnown RBP22.27■■□□□ 1.16
TRIM3-201ENST00000345851 NFASCO94856 1347 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 C15orf38-AP3S2A0A0A6YYH1 394 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.26■■□□□ 1.15
TRIM3-201ENST00000345851 CHN2P52757 468 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 YWHAGP61981 247 aaKnown RBP eCLIP22.26■■□□□ 1.15
TRIM3-201ENST00000345851 BASP1P80723 227 aaKnown RBP22.26■■□□□ 1.15
TRIM3-201ENST00000345851 ARPINQ7Z6K5 226 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 UPF1Q92900 1129 aaKnown RBP eCLIP22.26■■□□□ 1.15
TRIM3-201ENST00000345851 CCDC106Q9BWC9 280 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 PICK1Q9NRD5 415 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 GPRC5DQ9NZD1 345 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 FETUBQ9UGM5 382 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 POLIQ9UNA4 740 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 DESP17661 470 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 PTPRAP18433 802 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 SH3BGRP55822 239 aaPredicted RBP22.26■■□□□ 1.15
TRIM3-201ENST00000345851 RPS6P62753 249 aaKnown RBP22.26■■□□□ 1.15
TRIM3-201ENST00000345851 GTF2BQ00403 316 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 ZCCHC23Q6ZST2 131 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 MIER3Q7Z3K6 550 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 CTAGE3PQ8IX95 158 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 FEZF2Q8TBJ5 459 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 SENP7Q9BQF6 1050 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 ZDHHC7Q9NXF8 308 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 SOX13Q9UN79 622 aa22.26■■□□□ 1.15
TRIM3-201ENST00000345851 TRIM49D1C9J1S8 452 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 RGS2P41220 211 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 ELK3P41970 407 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 NOMO3P69849 1222 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 HPCAP84074 193 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 GRM2Q14416 872 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 PDIK1LQ8N165 341 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 NAT8LQ8N9F0 302 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 SNRNP27Q8WVK2 155 aaKnown RBP22.25■■□□□ 1.15
TRIM3-201ENST00000345851 E2F7Q96AV8 911 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 DGCR14Q96DF8 476 aaKnown RBP22.25■■□□□ 1.15
TRIM3-201ENST00000345851 SLC38A10Q9HBR0 1119 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 XPO7Q9UIA9 1087 aaKnown RBP22.25■■□□□ 1.15
TRIM3-201ENST00000345851 hCG_1818297A0A087WSY0 165 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 TCRBV9S1A1TA0A576 114 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 VILLO15195 856 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 ITGAVP06756 1048 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 SH2D4BQ5SQS7 431 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 FAM102BQ5T8I3 360 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 ACTL9Q8TC94 416 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 CNKSR2Q8WXI2 1034 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 C20orf27Q9GZN8 174 aa22.25■■□□□ 1.15
TRIM3-201ENST00000345851 ATP6V1B1P15313 513 aa22.24■■□□□ 1.15
TRIM3-201ENST00000345851 RPL22P35268 128 aaKnown RBP22.24■■□□□ 1.15
TRIM3-201ENST00000345851 RARRES1P49788 294 aa22.24■■□□□ 1.15
TRIM3-201ENST00000345851 ZNF200P98182 395 aaPredicted RBP22.24■■□□□ 1.15
TRIM3-201ENST00000345851 OTUD4Q01804 1114 aaKnown RBP22.24■■□□□ 1.15
TRIM3-201ENST00000345851 GCNT1Q02742 428 aa22.24■■□□□ 1.15
TRIM3-201ENST00000345851 SLC18A2Q05940 514 aa22.24■■□□□ 1.15
TRIM3-201ENST00000345851 TMED1Q13445 227 aa22.24■■□□□ 1.15
TRIM3-201ENST00000345851 LPAR1Q92633 364 aa22.24■■□□□ 1.15
TRIM3-201ENST00000345851 KBTBD13C9JR72 458 aa22.24■■□□□ 1.15
TRIM3-201ENST00000345851 PLA2G6O60733 806 aa22.24■■□□□ 1.15
TRIM3-201ENST00000345851 CPOXP36551 454 aa22.24■■□□□ 1.15
TRIM3-201ENST00000345851 BACE1P56817 501 aa22.24■■□□□ 1.15
TRIM3-201ENST00000345851 TFDP3Q5H9I0 405 aa22.24■■□□□ 1.15
TRIM3-201ENST00000345851 PLEKHA7Q6IQ23 1121 aa22.24■■□□□ 1.15
TRIM3-201ENST00000345851 TMEM270Q6UE05 265 aa22.24■■□□□ 1.15
TRIM3-201ENST00000345851 KYAT3Q6YP21 454 aaKnown RBP22.24■■□□□ 1.15
TRIM3-201ENST00000345851 MCEEQ96PE7 176 aa22.24■■□□□ 1.15
TRIM3-201ENST00000345851 PHF12Q96QT6 1004 aa22.24■■□□□ 1.15
TRIM3-201ENST00000345851 KCNH7Q9NS40 1196 aa22.24■■□□□ 1.15
TRIM3-201ENST00000345851 PTTG2Q9NZH5 202 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms