RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 JAM2P57087 298 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 PDE4CQ08493 712 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 IFRD2Q12894 506 aaPredicted RBP12.48□□□□□ -0.41
SNCA-202ENST00000345009 MTMR3Q13615 1198 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 SPECC1LQ69YQ0 1117 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 MTSS1LQ765P7 747 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 TADA2BQ86TJ2 420 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 PIGZQ86VD9 579 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 SLC47A2Q86VL8 602 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 SIX6OS1Q8N1H7 587 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 ARHGAP18Q8N392 663 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 MSANTD4Q8NCY6 345 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 UBA3Q8TBC4 463 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 FGF13Q92913 245 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 FBXO32Q969P5 355 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 NXPE3Q969Y0 559 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 LRRC3Q9BY71 257 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 MIS12Q9H081 205 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 LHX5Q9H2C1 402 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 AJAP1Q9UKB5 411 aaPredicted RBP12.48□□□□□ -0.41
SNCA-202ENST00000345009 PCDHGC3Q9UN70 934 aa12.48□□□□□ -0.41
SNCA-202ENST00000345009 A0A1W2PQJ5 194 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 TNFRSF10BO14763 440 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 EPHB6O15197 1021 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 SART1O43290 800 aaKnown RBP12.47□□□□□ -0.41
SNCA-202ENST00000345009 BEST1O76090 585 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 ABL1P00519 1130 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 LAMP2P13473 410 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 SSTR3P32745 418 aaPredicted RBP12.47□□□□□ -0.41
SNCA-202ENST00000345009 KIF11P52732 1056 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 ARID5AQ03989 594 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 TAF10Q12962 218 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 PRSS36Q5K4E3 855 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 SFMBT2Q5VUG0 894 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 GAREM2Q75VX8 874 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 MON1AQ86VX9 555 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 TTC30AQ86WT1 665 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 TMC8Q8IU68 726 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 ZDHHC14Q8IZN3 488 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 TMEM35BQ8NCS4 154 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 ZMIZ2Q8NF64 920 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 SCAMP5Q8TAC9 235 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 SLC35F5Q8WV83 523 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 KCTD13Q8WZ19 329 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 GOLGA1Q92805 767 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 SECISBP2LQ93073 1101 aaKnown RBP12.47□□□□□ -0.41
SNCA-202ENST00000345009 WNT2BQ93097 391 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 E2F7Q96AV8 911 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 TASP1Q9H6P5 420 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 ZNF334Q9HCZ1 680 aaPredicted RBP12.47□□□□□ -0.41
SNCA-202ENST00000345009 CYLDQ9NQC7 956 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 TLR8Q9NR97 1041 aaKnown RBP12.47□□□□□ -0.41
SNCA-202ENST00000345009 ST7Q9NRC1 585 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 IL37Q9NZH6 218 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 EPS15L1Q9UBC2 864 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 CDH22Q9UJ99 828 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 SCML2Q9UQR0 700 aa12.47□□□□□ -0.41
SNCA-202ENST00000345009 BZW2Q9Y6E2 419 aaKnown RBP12.47□□□□□ -0.41
SNCA-202ENST00000345009 NCANO14594 1321 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 DOCK6Q96HP0 2047 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 LOC730098B7Z3J9 87 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 FBXO21O94952 628 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 LSM8O95777 96 aaKnown RBP12.46□□□□□ -0.41
SNCA-202ENST00000345009 ZBED1O96006 694 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 F11P03951 625 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 AVPR1AP37288 418 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 PBX1P40424 430 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 GPD2P43304 727 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 TKTL1P51854 596 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 USP46P62068 366 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 ZBED6P86452 979 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 CDR2Q01850 454 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 ZP2Q05996 745 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 TEAD2Q15562 447 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 ASIC2Q16515 512 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 SLC5A9Q2M3M2 681 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 PKDCCQ504Y2 493 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 GPR158Q5T848 1215 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 PPP1R2P3Q6NXS1 205 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 TRIM72Q6ZMU5 477 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 VPS36Q86VN1 386 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 GAS2L3Q86XJ1 694 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 NPAS3Q8IXF0 933 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 GJD3Q8N144 294 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 ITFG1Q8TB96 612 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 SHKBP1Q8TBC3 707 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 ADAMTS19Q8TE59 1207 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 CPLX3Q8WVH0 158 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 ING5Q8WYH8 240 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 SYN2Q92777 582 aaPredicted RBP12.46□□□□□ -0.41
SNCA-202ENST00000345009 TCEAL4Q96EI5 215 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 MCRS1Q96EZ8 462 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 CDK5RAP1Q96SZ6 601 aaKnown RBP12.46□□□□□ -0.41
SNCA-202ENST00000345009 ZSWIM1Q9BR11 485 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 TRIM62Q9BVG3 475 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 NACA2Q9H009 215 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 SYNCQ9H7C4 482 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 IL21Q9HBE4 155 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 ACP6Q9NPH0 428 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 CNGB3Q9NQW8 809 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms