RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 ELF2Q15723 593 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 MLF2Q15773 248 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 ACAD10Q6JQN1 1059 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 RSPO2Q6UXX9 243 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 MTSS1LQ765P7 747 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 GRASPQ7Z6J2 395 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 SLFN11Q7Z7L1 901 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 ZBTB44Q8NCP5 570 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 SLC35G2Q8TBE7 412 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 TSC1Q92574 1164 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 RABGGTAQ92696 567 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 NELL1Q92832 810 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 KIF12Q96FN5 646 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 BCO2Q9BYV7 579 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 ACP6Q9NPH0 428 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 RNF14Q9UBS8 474 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 MTF2Q9Y483 593 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 LILRB5O75023 590 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 KRT37O76014 449 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 FTCDO95954 541 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 CYP1A1P04798 512 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 MYBL1P10243 752 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 HOXA9P31269 272 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 CENPCQ03188 943 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 GRIK3Q13003 919 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 ERCC6LQ2NKX8 1250 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 SLC44A4Q53GD3 710 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 RTP2Q5QGT7 225 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 TEX35Q5T0J7 233 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 C11orf63Q6NUN7 778 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 PRSS55Q6UWB4 352 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 ZNF572Q7Z3I7 529 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 DNAAF5Q86Y56 855 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 TTC39CQ8N584 583 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 CXorf38Q8TB03 319 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 FGF13Q92913 245 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 ARHGEF26Q96DR7 871 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 NXF3Q9H4D5 531 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 CYP3A43Q9HB55 503 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 CISHQ9NSE2 258 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 SPATA6Q9NWH7 488 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 DPP3Q9NY33 737 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 CNTN3Q9P232 1028 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 UVRAGQ9P2Y5 699 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 NCDNQ9UBB6 729 aa14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 V9GYY5 206 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-202ENST00000344114 THAP12O43422 761 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 XPOTO43592 962 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 KIF4AO95239 1232 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 CYP1A2P05177 515 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 POU2F2P09086 479 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 UNGP13051 313 aaPredicted RBP14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 POLR2BP30876 1174 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 ATXN1P54253 815 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 NTHL1P78549 312 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 RBP5P82980 135 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 SCARA5Q6ZMJ2 495 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 DAAM2Q86T65 1068 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 HACE1Q8IYU2 909 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 BEST2Q8NFU1 509 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 PIK3R5Q8WYR1 880 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 ZNF653Q96CK0 615 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 CLSTN3Q9BQT9 956 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 APOL6Q9BWW8 343 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 EPC1Q9H2F5 836 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 PDCL3Q9H2J4 239 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 LTB4R2Q9NPC1 389 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 AVENQ9NQS1 362 aaPredicted RBP14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 SNTG2Q9NY99 539 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 CTTNBP2NLQ9P2B4 639 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 PTPRDP23468 1912 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 GPR179Q6PRD1 2367 aa14.24□□□□□ -0.13
HERPUD1-202ENST00000344114 FAM170BA6NMN3 283 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 SRGAP2O75044 1071 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 RECQL4O94761 1208 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 LSM8O95777 96 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 C8AP07357 584 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 AKAP5P24588 427 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 PAFAH1B1P43034 410 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 NSFP46459 744 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 NOMO3P69849 1222 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 PFKPQ01813 784 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 CSTF1Q05048 431 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 NAA30Q147X3 362 aaPredicted RBP14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 UBXN2BQ14CS0 331 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 RPS6KA1Q15418 735 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 CCDC181Q5TID7 509 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 SCARA3Q6AZY7 606 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 ALKAL1Q6UXT8 129 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 PEX26Q7Z412 305 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 CLDN23Q96B33 292 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 VCPIP1Q96JH7 1222 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 PBKQ96KB5 322 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 CAPZA3Q96KX2 299 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 PAAF1Q9BRP4 392 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 ABCB6Q9NP58 842 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 OSGEPQ9NPF4 335 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 ZSCAN32Q9NX65 697 aa14.23□□□□□ -0.13
HERPUD1-202ENST00000344114 AMFRQ9UKV5 643 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms