RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 GSTA1P08263 222 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 YBX3P16989 372 aaKnown RBP eCLIP15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 SMPD1P17405 629 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 NOMO1Q15155 1222 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 CA9Q16790 459 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 PPP6R3Q5H9R7 873 aaPredicted RBP15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 HHATQ5VTY9 493 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 DENND1AQ8TEH3 1009 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 SLC24A2Q9UI40 661 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 KCNN4O15554 427 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 PRPF4O43172 522 aaKnown RBP eCLIP15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 ELK3P41970 407 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 GTF2A1P52655 376 aaPredicted RBP15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 KCNJ2P63252 427 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 ELF3P78545 371 aaPredicted RBP15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 RNASELQ05823 741 aaKnown RBP15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 SNCBQ16143 134 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 OR6J1Q8NGC5 347 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 OR6B3Q8NGW1 331 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 FAF2Q96CS3 445 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 FAXDC2Q96IV6 333 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 DPEP3Q9H4B8 488 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 CDHR5Q9HBB8 845 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 GBA2Q9HCG7 927 aaPredicted RBP15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 SMG5Q9UPR3 1016 aaKnown RBP15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 NME7Q9Y5B8 376 aa15.54■□□□□ 0.08
VIPAS39-202ENST00000343765 TFE3P19532 575 aaPredicted RBP15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 MSH2P43246 934 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 NCALDP61601 193 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 YWHAGP61981 247 aaKnown RBP eCLIP15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 ACAP1Q15027 740 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 LVRNQ6Q4G3 990 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 CATSPER4Q7RTX7 472 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 ECHDC2Q86YB7 292 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 CLEC4CQ8WTT0 213 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 OSMRQ99650 979 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 RAB6BQ9NRW1 208 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 PRKAG3Q9UGI9 489 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 PHTF1Q9UMS5 762 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 TRIM33Q9UPN9 1127 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 MMP3P08254 477 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 PDGFRBP09619 1106 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 GBP2P32456 591 aaPredicted RBP15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 GRM5P41594 1212 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 ATXN1P54253 815 aaKnown RBP15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 OLFML1Q6UWY5 402 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 SESTD1Q86VW0 696 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 LRRC8CQ8TDW0 803 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 RNF157Q96PX1 679 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 KATNBL1Q9H079 304 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 ALG13Q9NP73 1137 aaKnown RBP15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 BAIAP2L1Q9UHR4 511 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 SCN1AP35498 2009 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 BTBD19C9JJ37 291 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 AKAP5P24588 427 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 ADORA2BP29275 332 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 SDC4P31431 198 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 TFDP2Q14188 446 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 SEPT7Q16181 437 aaKnown RBP15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 KYAT1Q16773 422 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 USP50Q70EL3 339 aaPredicted RBP15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 CFAP36Q96G28 342 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 MAGEB5Q9BZ81 275 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 NXF3Q9H4D5 531 aaKnown RBP15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 ACSS3Q9H6R3 686 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 SENP1Q9P0U3 644 aa15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 ZMYND8Q9ULU4 1186 aaPredicted RBP15.53■□□□□ 0.08
VIPAS39-202ENST00000343765 KBTBD13C9JR72 458 aa15.52■□□□□ 0.08
VIPAS39-202ENST00000343765 ADCY6O43306 1168 aa15.52■□□□□ 0.08
VIPAS39-202ENST00000343765 TYROBPO43914 113 aa15.52■□□□□ 0.08
VIPAS39-202ENST00000343765 FGFR1P11362 822 aa15.52■□□□□ 0.08
VIPAS39-202ENST00000343765 ADRA1DP25100 572 aa15.52■□□□□ 0.08
VIPAS39-202ENST00000343765 RBL1P28749 1068 aa15.52■□□□□ 0.08
VIPAS39-202ENST00000343765 HOXA11P31270 313 aaPredicted RBP15.52■□□□□ 0.08
VIPAS39-202ENST00000343765 BCAR1P56945 870 aa15.52■□□□□ 0.08
VIPAS39-202ENST00000343765 KLHL38Q2WGJ6 581 aa15.52■□□□□ 0.08
VIPAS39-202ENST00000343765 DPY19L2Q6NUT2 758 aa15.52■□□□□ 0.08
VIPAS39-202ENST00000343765 PLD5Q8N7P1 536 aa15.52■□□□□ 0.08
VIPAS39-202ENST00000343765 SNRNP25Q9BV90 132 aaKnown RBP15.52■□□□□ 0.08
VIPAS39-202ENST00000343765 RXFP1Q9HBX9 757 aa15.52■□□□□ 0.08
VIPAS39-202ENST00000343765 KLK14Q9P0G3 267 aa15.52■□□□□ 0.08
VIPAS39-202ENST00000343765 HESX1Q9UBX0 185 aa15.52■□□□□ 0.08
VIPAS39-202ENST00000343765 CITO14578 2027 aa15.52■□□□□ 0.07
VIPAS39-202ENST00000343765 COL1A2P08123 1366 aa15.52■□□□□ 0.07
VIPAS39-202ENST00000343765 CCL15-CCL14A0A0B4J2E2 113 aa15.52■□□□□ 0.07
VIPAS39-202ENST00000343765 LOC102724159A0A0B4J2E5 919 aa15.52■□□□□ 0.07
VIPAS39-202ENST00000343765 E7ESA3 106 aa15.52■□□□□ 0.07
VIPAS39-202ENST00000343765 PAPSS1O43252 624 aaPredicted RBP15.52■□□□□ 0.07
VIPAS39-202ENST00000343765 CCDC130P13994 396 aa15.52■□□□□ 0.07
VIPAS39-202ENST00000343765 IL4RP24394 825 aa15.52■□□□□ 0.07
VIPAS39-202ENST00000343765 PWP2Q15269 919 aaKnown RBP15.52■□□□□ 0.07
VIPAS39-202ENST00000343765 CCL15Q16663 113 aa15.52■□□□□ 0.07
VIPAS39-202ENST00000343765 GALNTL6Q49A17 601 aa15.52■□□□□ 0.07
VIPAS39-202ENST00000343765 FAM47CQ5HY64 1035 aa15.52■□□□□ 0.07
VIPAS39-202ENST00000343765 FAM228AQ86W67 206 aa15.52■□□□□ 0.07
VIPAS39-202ENST00000343765 CEP57Q86XR8 500 aa15.52■□□□□ 0.07
VIPAS39-202ENST00000343765 MAP7D3Q8IWC1 876 aa15.52■□□□□ 0.07
VIPAS39-202ENST00000343765 TRIM6Q9C030 488 aaPredicted RBP15.52■□□□□ 0.07
VIPAS39-202ENST00000343765 PCDH18Q9HCL0 1135 aa15.52■□□□□ 0.07
VIPAS39-202ENST00000343765 IGF2BP3O00425 579 aaKnown RBP eCLIP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms