RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 OSBPL1AQ9BXW6 950 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 MAGEF1Q9HAY2 307 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 MOSPD3O75425 235 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 EPCAMP16422 314 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 FAM160A1Q05DH4 1040 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 TTMPQ5BVD1 217 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 CMPK2Q5EBM0 449 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 KRT40Q6A162 431 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 SWSAP1Q6NVH7 229 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 ANO5Q75V66 913 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 BEND5Q7L4P6 421 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 C12orf56Q8IXR9 622 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 FAM160A2Q8N612 972 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-202ENST00000343599 SNIP1Q8TAD8 396 aaKnown RBP7.74□□□□□ -1.17
ZNF540-202ENST00000343599 WDR48Q8TAF3 677 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 AENQ8WTP8 325 aaKnown RBP7.74□□□□□ -1.17
ZNF540-202ENST00000343599 MAIP1Q8WWC4 291 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 BRD8Q9H0E9 1235 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 GOLPH3LQ9H4A5 285 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 LRRD1A4D1F6 860 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 GJB3O75712 270 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 MAPK1P28482 360 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 DMWDQ09019 674 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 SPRED3Q2MJR0 410 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 CCNI2Q6ZMN8 369 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-202ENST00000343599 IQCF2Q8IXL9 164 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 ARL10Q8N8L6 244 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 FAM83CQ9BQN1 747 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 CORO1BQ9BR76 489 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 PDZD7Q9H5P4 517 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 ARHGAP26Q9UNA1 814 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 ATP8A1Q9Y2Q0 1164 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 NUMBLQ9Y6R0 609 aa7.74□□□□□ -1.17
ZNF540-202ENST00000343599 SRCAPQ6ZRS2 3230 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 TRANK1O15050 2925 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 ALDH1A2O94788 518 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 DDHD2O94830 711 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 KCNK5O95279 499 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 CCDC175P0C221 793 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 SFTPCP11686 197 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 HARSP12081 509 aaKnown RBP7.73□□□□□ -1.17
ZNF540-202ENST00000343599 VAMP1P23763 118 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 DGKEP52429 567 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 PHEXP78562 749 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 SLFN12LQ6IEE8 588 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.73□□□□□ -1.17
ZNF540-202ENST00000343599 GPKOWQ92917 476 aaPredicted RBP eCLIP7.73□□□□□ -1.17
ZNF540-202ENST00000343599 PKMYT1Q99640 499 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 RAB34Q9BZG1 259 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 NDST4Q9H3R1 872 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 PIDD1Q9HB75 910 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 SEMA4GQ9NTN9 838 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 GALNT8Q9NY28 637 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 TBC1D14Q9P2M4 693 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 SFMBT1Q9UHJ3 866 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 CFAP45Q9UL16 551 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 UBQLN1Q9UMX0 589 aaKnown RBP7.73□□□□□ -1.17
ZNF540-202ENST00000343599 L3MBTL1Q9Y468 752 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 INSL5Q9Y5Q6 135 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 CLEC18AA5D8T8 446 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 TIMM44O43615 452 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 HOXC13P31276 330 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 SESN3P58005 492 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 NR1H3Q13133 447 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 CUL4BQ13620 913 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 DPCR1Q3MIW9 517 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 EOGTQ5NDL2 527 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 C10orf62Q5T681 223 aaPredicted RBP7.73□□□□□ -1.17
ZNF540-202ENST00000343599 TSHZ3Q63HK5 1081 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 CLEC18BQ6UXF7 455 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 CATSPER4Q7RTX7 472 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 TOP6BLQ8N6T0 577 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 TC2NQ8N9U0 490 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 CLEC18CQ8NCF0 446 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 C1orf131Q8NDD1 294 aaKnown RBP7.73□□□□□ -1.17
ZNF540-202ENST00000343599 DNASE2BQ8WZ79 361 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 PPP1R14BQ96C90 147 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 CYFIP2Q96F07 1278 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 STRA6Q9BX79 667 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 FBXO10Q9UK96 956 aa7.73□□□□□ -1.17
ZNF540-202ENST00000343599 BZW2Q9Y6E2 419 aaKnown RBP7.73□□□□□ -1.17
ZNF540-202ENST00000343599 TRPC1P48995 793 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 UBASH3AP57075 661 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 NOP14P78316 857 aaKnown RBP7.72□□□□□ -1.17
ZNF540-202ENST00000343599 MRPS35P82673 323 aaKnown RBP7.72□□□□□ -1.17
ZNF540-202ENST00000343599 MXRA7P84157 204 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 GRIN1Q05586 938 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 RESTQ13127 1097 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 NFE2Q16621 373 aaPredicted RBP7.72□□□□□ -1.17
ZNF540-202ENST00000343599 ITPRIPL2Q3MIP1 535 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 CFAP221Q4G0U5 840 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 VSTM1Q6UX27 236 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 NUDT18Q6ZVK8 323 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 FAM3CQ92520 227 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 TRAPPC9Q96Q05 1148 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 NAPGQ99747 312 aaPredicted RBP7.72□□□□□ -1.17
ZNF540-202ENST00000343599 GABRG3Q99928 467 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 KIAA1586Q9HCI6 787 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 PCDH18Q9HCL0 1135 aa7.72□□□□□ -1.17
ZNF540-202ENST00000343599 NCKIPSDQ9NZQ3 722 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms