RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 MIS12Q9H081 205 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 ITGA11Q9UKX5 1188 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 TEX264Q9Y6I9 313 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 PLXNB2O15031 1838 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 LOC102724159A0A0B4J2E5 919 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 TCRBV9S1A1TA0A576 114 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 A8MUI8 341 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 E5RJQ4 531 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 CXCL11O14625 94 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 CHADO15335 359 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 STAU1O95793 577 aaKnown RBP15.19■□□□□ 0.02
TDP2-201ENST00000341060 INSRRP14616 1297 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 PDGFRAP16234 1089 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 ARF4P18085 180 aaPredicted RBP15.19■□□□□ 0.02
TDP2-201ENST00000341060 CYP3A5P20815 502 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 CCND1P24385 295 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 ELK3P41970 407 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 NDST1P52848 882 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 IGBP1P78318 339 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 CBLBQ13191 982 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 PWP2Q15269 919 aaKnown RBP15.19■□□□□ 0.02
TDP2-201ENST00000341060 SEPT7Q16181 437 aaKnown RBP15.19■□□□□ 0.02
TDP2-201ENST00000341060 PARP6Q2NL67 630 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 FAM183BPQ6ZVS7 135 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 ERO1BQ86YB8 467 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 IGDCC3Q8IVU1 814 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 TTC39CQ8N584 583 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 RXFP2Q8WXD0 754 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 CPB2Q96IY4 423 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 PIWIL1Q96J94 861 aaKnown RBP15.19■□□□□ 0.02
TDP2-201ENST00000341060 VPS11Q9H270 941 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 PDGFCQ9NRA1 345 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 TSPAN16Q9UKR8 245 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 KIAA1257Q9ULG3 409 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 C2CD2Q9Y426 696 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 L3MBTL1Q9Y468 752 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 PDCD11Q14690 1871 aaKnown RBP15.19■□□□□ 0.02
TDP2-201ENST00000341060 IQANK1A0A1B0GTG1 560 aa15.18■□□□□ 0.02
TDP2-201ENST00000341060 KBTBD13C9JR72 458 aa15.18■□□□□ 0.02
TDP2-201ENST00000341060 C2CD2LO14523 706 aa15.18■□□□□ 0.02
TDP2-201ENST00000341060 PRPSAP2O60256 369 aa15.18■□□□□ 0.02
TDP2-201ENST00000341060 SPAG6O75602 509 aa15.18■□□□□ 0.02
TDP2-201ENST00000341060 C15orf59Q2T9L4 293 aaPredicted RBP15.18■□□□□ 0.02
TDP2-201ENST00000341060 RAB6CQ53S08 254 aa15.18■□□□□ 0.02
TDP2-201ENST00000341060 FYB2Q5VWT5 728 aa15.18■□□□□ 0.02
TDP2-201ENST00000341060 INPP5DQ92835 1189 aa15.18■□□□□ 0.02
TDP2-201ENST00000341060 RTP4Q96DX8 246 aa15.18■□□□□ 0.02
TDP2-201ENST00000341060 RNF157Q96PX1 679 aa15.18■□□□□ 0.02
TDP2-201ENST00000341060 RAB6CQ9H0N0 254 aa15.18■□□□□ 0.02
TDP2-201ENST00000341060 LGALS2P05162 132 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 TARSP26639 723 aaKnown RBP15.17■□□□□ 0.02
TDP2-201ENST00000341060 PTK7Q13308 1070 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 PDK2Q15119 407 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 SLC45A4Q5BKX6 768 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 OR6B2Q6IFH4 312 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 DPH6Q7L8W6 267 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 MAP7D3Q8IWC1 876 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 GIMAP7Q8NHV1 300 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.17■□□□□ 0.02
TDP2-201ENST00000341060 SLC44A1Q8WWI5 657 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 UTP4Q969X6 686 aaKnown RBP15.17■□□□□ 0.02
TDP2-201ENST00000341060 STAMBPL1Q96FJ0 436 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 MYCBPQ99417 103 aaPredicted RBP15.17■□□□□ 0.02
TDP2-201ENST00000341060 GBA2Q9HCG7 927 aaPredicted RBP15.17■□□□□ 0.02
TDP2-201ENST00000341060 KCNH4Q9UQ05 1017 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 IQCA1LA6NCM1 817 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 GOLGA8RI6L899 631 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 PFKMP08237 780 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 ATP11AP98196 1134 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 ARHGAP1Q07960 439 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 STILQ15468 1287 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 CDO1Q16878 200 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 KBTBD12Q3ZCT8 623 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 NT5DC4Q86YG4 428 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 AGGF1Q8N302 714 aaeCLIP15.17■□□□□ 0.02
TDP2-201ENST00000341060 USP6NLQ92738 828 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 CLMNQ96JQ2 1002 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 TMEM237Q96Q45 408 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 PPP1R16BQ96T49 567 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 NT5C1AQ9BXI3 368 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 MROH8Q9H579 483 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 USP29Q9HBJ7 922 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 DPP3Q9NY33 737 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 PAK5Q9P286 719 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 SLC17A7Q9P2U7 560 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 AKT3Q9Y243 479 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 IKBKGQ9Y6K9 419 aa15.17■□□□□ 0.02
TDP2-201ENST00000341060 SPDYE5A6NIY4 337 aa15.16■□□□□ 0.02
TDP2-201ENST00000341060 H7C0C1 242 aa15.16■□□□□ 0.02
TDP2-201ENST00000341060 PIK3R2O00459 728 aa15.16■□□□□ 0.02
TDP2-201ENST00000341060 DPYSL4O14531 572 aa15.16■□□□□ 0.02
TDP2-201ENST00000341060 LPXNO60711 386 aa15.16■□□□□ 0.02
TDP2-201ENST00000341060 WFS1O76024 890 aa15.16■□□□□ 0.02
TDP2-201ENST00000341060 DHRS4L1P0CG22 281 aa15.16■□□□□ 0.02
TDP2-201ENST00000341060 T-ENOLP0DO92 83 aa15.16■□□□□ 0.02
TDP2-201ENST00000341060 TROVE2P10155 538 aaKnown RBP eCLIP15.16■□□□□ 0.02
TDP2-201ENST00000341060 TGM2P21980 687 aa15.16■□□□□ 0.02
TDP2-201ENST00000341060 IL4RP24394 825 aa15.16■□□□□ 0.02
TDP2-201ENST00000341060 ATP5OP48047 213 aa15.16■□□□□ 0.02
TDP2-201ENST00000341060 RBP5P82980 135 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms