RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 PTPN20Q4JDL3 420 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 LMO3Q8TAP4 145 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 RSPH1Q8WYR4 309 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 BHMTQ93088 406 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 VCPIP1Q96JH7 1222 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.27□□□□□ -0.45
C2orf88-201ENST00000340623 ZSCAN5CA6NGD5 496 aaPredicted RBP12.27□□□□□ -0.45
C2orf88-201ENST00000340623 CCDC188H7C350 402 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 BNIP3LO60238 219 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 SPATA31D3P0C874 917 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 MYZAPP0CAP1 466 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 CCT5P48643 541 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 AFF1P51825 1210 aaKnown RBP12.27□□□□□ -0.45
C2orf88-201ENST00000340623 TPI1P60174 286 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 SPATA31D4Q6ZUB0 917 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 C3orf20Q8ND61 904 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 CPXM1Q96SM3 734 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 ZSWIM1Q9BR11 485 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 SPON2Q9BUD6 331 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 TJP2Q9UDY2 1190 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 DNAJB4Q9UDY4 337 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 GRIN2DO15399 1336 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 A0A0A6YYK5 440 aaPredicted RBP12.26□□□□□ -0.45
C2orf88-201ENST00000340623 ABHD14A-ACY1A0A1B0GW23 586 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 H3BRJ5 948 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 DPYSL4O14531 572 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 ZNF623O75123 536 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 UAP1Q16222 522 aaPredicted RBP12.26□□□□□ -0.45
C2orf88-201ENST00000340623 VARS2Q5ST30 1063 aaKnown RBP12.26□□□□□ -0.45
C2orf88-201ENST00000340623 FAM183BPQ6ZVS7 135 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 EPAS1Q99814 870 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 SDCBP2Q9H190 292 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 TTC7AQ9ULT0 858 aaPredicted RBP12.26□□□□□ -0.45
C2orf88-201ENST00000340623 SNX24Q9Y343 169 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 FBXO21O94952 628 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 CKMP06732 381 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 VIMP08670 466 aaKnown RBP12.26□□□□□ -0.45
C2orf88-201ENST00000340623 KRT10P13645 584 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 LAG3P18627 525 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 CYP2F1P24903 491 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 SLC6A3Q01959 620 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 LMNB2Q03252 620 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 DUSP4Q13115 394 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 C15orf59Q2T9L4 293 aaPredicted RBP12.26□□□□□ -0.45
C2orf88-201ENST00000340623 PRSS55Q6UWB4 352 aaPredicted RBP12.26□□□□□ -0.45
C2orf88-201ENST00000340623 VPS52Q8N1B4 723 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 SH2D3CQ8N5H7 860 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 STKLD1Q8NE28 680 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 BADQ92934 168 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 XYLT2Q9H1B5 865 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 RGS18Q9NS28 235 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 NOCTQ9UK39 431 aaKnown RBP12.26□□□□□ -0.45
C2orf88-201ENST00000340623 MRPL42Q9Y6G3 142 aaKnown RBP12.26□□□□□ -0.45
C2orf88-201ENST00000340623 SQORQ9Y6N5 450 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 PTGESO14684 152 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 PJA2O43164 708 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 CST8O60676 142 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 SASH3O75995 380 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 CFHP08603 1231 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 H2AFXP16104 143 aaPredicted RBP12.26□□□□□ -0.45
C2orf88-201ENST00000340623 PPM1AP35813 382 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 DHX9Q08211 1270 aaKnown RBP12.26□□□□□ -0.45
C2orf88-201ENST00000340623 LINC01465Q8N7H1 131 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 NDRG1Q92597 394 aaKnown RBP12.26□□□□□ -0.45
C2orf88-201ENST00000340623 CCDC77Q9BR77 488 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 TRIM7Q9C029 511 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 WDCPQ9H6R7 721 aa12.26□□□□□ -0.45
C2orf88-201ENST00000340623 AVENQ9NQS1 362 aaPredicted RBP12.26□□□□□ -0.45
C2orf88-201ENST00000340623 CHRNB2P17787 502 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 YWHAQP27348 245 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 MAN1A1P33908 653 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 IFNAR2P48551 515 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 EPHB3P54753 998 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 CENPCQ03188 943 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 MAMLD1Q13495 774 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 LCLAT1Q6UWP7 414 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 RCOR2Q8IZ40 523 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 PCED1BQ96HM7 432 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 CFAP57Q96MR6 1250 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 HOMER3Q9NSC5 361 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 SMPD4Q9NXE4 827 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 TRPM5Q9NZQ8 1165 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 PCDH10Q9P2E7 1040 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 MYL4P12829 197 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 ATP2A2P16615 1042 aaKnown RBP12.25□□□□□ -0.45
C2orf88-201ENST00000340623 KCNJ1P48048 391 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 GJA8P48165 433 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 PLPP4Q5VZY2 271 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.25□□□□□ -0.452e-7■■□□□ 14
C2orf88-201ENST00000340623 OGDHLQ9ULD0 1010 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 CXCL14O95715 111 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 IVLP07476 585 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 CARSP49589 748 aaKnown RBP12.25□□□□□ -0.45
C2orf88-201ENST00000340623 KCNT2Q6UVM3 1135 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 ARHGEF18Q6ZSZ5 1173 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 DENND5BQ6ZUT9 1274 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 CHSY1Q86X52 802 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 CCDC33Q8N5R6 958 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 ANKRD42Q8N9B4 389 aa12.25□□□□□ -0.45
C2orf88-201ENST00000340623 FAM71BQ8TC56 605 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms