RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 KCNK9Q9NPC2 374 aa16.62■□□□□ 0.25
CCDC144A-202ENST00000340621 GDAP2Q9NXN4 497 aa16.62■□□□□ 0.25
CCDC144A-202ENST00000340621 EURLQ9NYK6 297 aa16.62■□□□□ 0.25
CCDC144A-202ENST00000340621 TCRBV7S3A2A0A539 114 aa16.62■□□□□ 0.25
CCDC144A-202ENST00000340621 MCF2LO15068 1137 aa16.62■□□□□ 0.25
CCDC144A-202ENST00000340621 KRT81Q14533 505 aa16.62■□□□□ 0.25
CCDC144A-202ENST00000340621 CA9Q16790 459 aa16.62■□□□□ 0.25
CCDC144A-202ENST00000340621 MSS51Q4VC12 460 aa16.62■□□□□ 0.25
CCDC144A-202ENST00000340621 FNBP1LQ5T0N5 605 aa16.62■□□□□ 0.25
CCDC144A-202ENST00000340621 C1orf228Q6PIY5 440 aa16.62■□□□□ 0.25
CCDC144A-202ENST00000340621 ANKMY2Q8IV38 441 aa16.62■□□□□ 0.25
CCDC144A-202ENST00000340621 CCDC13Q8IYE1 715 aa16.62■□□□□ 0.25
CCDC144A-202ENST00000340621 ANKRD52Q8NB46 1076 aa16.62■□□□□ 0.25
CCDC144A-202ENST00000340621 MAML1Q92585 1016 aa16.62■□□□□ 0.25
CCDC144A-202ENST00000340621 P3H4Q92791 437 aa16.62■□□□□ 0.25
CCDC144A-202ENST00000340621 CCDC134Q9H6E4 229 aa16.62■□□□□ 0.25
CCDC144A-202ENST00000340621 Q9Y3F1 56 aa16.62■□□□□ 0.25
CCDC144A-202ENST00000340621 EXOC1LA0A1B0GW35 172 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 BRAFP15056 766 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 PURAQ00577 322 aaKnown RBP16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 TFDP2Q14188 446 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 NOMO1Q15155 1222 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 HIF1AQ16665 826 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 GKAP1Q5VSY0 366 aaPredicted RBP16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 DARS2Q6PI48 645 aaKnown RBP16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 MAP7D3Q8IWC1 876 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 LRRC34Q8IZ02 419 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 NME8Q8N427 588 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 PLD5Q8N7P1 536 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 SNX25Q9H3E2 840 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 VPS37BQ9H9H4 285 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 DOCK3Q8IZD9 2030 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 MANSC4A6NHS7 340 aaPredicted RBP16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 NDC80O14777 642 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 IGHA2P01877 340 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 LCP1P13796 627 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 RGS2P41220 211 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 MAGEA9P43362 315 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 HDAC4P56524 1084 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 ADCY1Q08828 1119 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 PDK2Q15119 407 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 FAM47CQ5HY64 1035 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 SRRM1Q8IYB3 904 aaKnown RBP16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 OTUD6BQ8N6M0 293 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 ANKRD42Q8N9B4 389 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 APPL2Q8NEU8 664 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 ADAM33Q9BZ11 813 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 MLXIPLQ9NP71 852 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 TRIP11Q15643 1979 aa16.61■□□□□ 0.25
CCDC144A-202ENST00000340621 ZNF236Q9UL36 1845 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 MYADML2A6NDP7 307 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 POC1B-GALNT4F8VUJ3 575 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 KIAA0754O94854 1291 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 IGFBP6P24592 240 aaPredicted RBP16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 HOXC8P31273 242 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 STIP1P31948 543 aaKnown RBP16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 TAF6P49848 677 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 SNX16P57768 344 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 GPX6P59796 221 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 LILRA4P59901 499 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 ROR1Q01973 937 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 BST2Q10589 180 aaKnown RBP16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 MTM1Q13496 603 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 LIMS2Q7Z4I7 341 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 YTHDF3Q7Z739 585 aaKnown RBP16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 ZDHHC17Q8IUH5 632 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 PQLC3Q8N755 202 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 SLC2A14Q8TDB8 520 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 CABS1Q96KC9 395 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 ZNF560Q96MR9 790 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 KATNAL1Q9BW62 490 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 PCDH18Q9HCL0 1135 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 PNPLA4P41247 253 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 ATXN1P54253 815 aaKnown RBP16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 BCAT1P54687 386 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 TMED2Q15363 201 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 ANKRD20A8PQ5CZ79 823 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 RNF187Q5TA31 235 aaPredicted RBP16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 TWF2Q6IBS0 349 aaKnown RBP16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 IFNL1Q8IU54 200 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 CACNA2D3Q8IZS8 1091 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 PCDH19Q8TAB3 1148 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 TEKT4Q8WW24 435 aa16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 SNRNP25Q9BV90 132 aaKnown RBP16.6■□□□□ 0.25
CCDC144A-202ENST00000340621 ATXN2Q99700 1313 aaKnown RBP16.59■□□□□ 0.25
CCDC144A-202ENST00000340621 XPOTO43592 962 aaKnown RBP16.59■□□□□ 0.25
CCDC144A-202ENST00000340621 TMEM63AO94886 807 aa16.59■□□□□ 0.25
CCDC144A-202ENST00000340621 VIMP08670 466 aaKnown RBP16.59■□□□□ 0.25
CCDC144A-202ENST00000340621 GNAT1P11488 350 aa16.59■□□□□ 0.25
CCDC144A-202ENST00000340621 LIG3P49916 1009 aa16.59■□□□□ 0.25
CCDC144A-202ENST00000340621 ARL4CP56559 192 aa16.59■□□□□ 0.25
CCDC144A-202ENST00000340621 TADA2BQ86TJ2 420 aa16.59■□□□□ 0.25
CCDC144A-202ENST00000340621 FAM228AQ86W67 206 aa16.59■□□□□ 0.25
CCDC144A-202ENST00000340621 ZFP42Q96MM3 310 aa16.59■□□□□ 0.25
CCDC144A-202ENST00000340621 APBA2Q99767 749 aa16.59■□□□□ 0.25
CCDC144A-202ENST00000340621 WDR83Q9BRX9 315 aaKnown RBP16.59■□□□□ 0.25
CCDC144A-202ENST00000340621 C11orf84Q9BUA3 381 aaPredicted RBP16.59■□□□□ 0.25
CCDC144A-202ENST00000340621 MAGEB5Q9BZ81 275 aa16.59■□□□□ 0.25
CCDC144A-202ENST00000340621 RASSF4Q9H2L5 321 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms