RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 MBD3O95983 291 aa16.29■□□□□ 0.2
VAPA-201ENST00000340541 FAM200BP0CF97 657 aa16.29■□□□□ 0.2
VAPA-201ENST00000340541 TBXAS1P24557 533 aaPredicted RBP16.29■□□□□ 0.2
VAPA-201ENST00000340541 AVPR1AP37288 418 aa16.29■□□□□ 0.2
VAPA-201ENST00000340541 SLC5A3P53794 718 aa16.29■□□□□ 0.2
VAPA-201ENST00000340541 MAP3K7CLP57077 242 aa16.29■□□□□ 0.2
VAPA-201ENST00000340541 ZNF268Q14587 947 aaPredicted RBP16.29■□□□□ 0.2
VAPA-201ENST00000340541 CT47A1Q5JQC4 288 aaPredicted RBP16.29■□□□□ 0.2
VAPA-201ENST00000340541 ARHGAP17Q68EM7 881 aa16.29■□□□□ 0.2
VAPA-201ENST00000340541 GPRIN1Q7Z2K8 1008 aa16.29■□□□□ 0.2
VAPA-201ENST00000340541 ARHGEF19Q8IW93 802 aa16.29■□□□□ 0.2
VAPA-201ENST00000340541 FAM3CQ92520 227 aa16.29■□□□□ 0.2
VAPA-201ENST00000340541 RMDN1Q96DB5 314 aa16.29■□□□□ 0.2
VAPA-201ENST00000340541 NT5C1BQ96P26 610 aa16.29■□□□□ 0.2
VAPA-201ENST00000340541 THAP9Q9H5L6 903 aa16.29■□□□□ 0.2
VAPA-201ENST00000340541 TRPC7Q9HCX4 862 aa16.29■□□□□ 0.2
VAPA-201ENST00000340541 TDP1Q9NUW8 608 aa16.29■□□□□ 0.2
VAPA-201ENST00000340541 DACH1Q9UI36 760 aa16.29■□□□□ 0.2
VAPA-201ENST00000340541 CHADO15335 359 aa16.28■□□□□ 0.2
VAPA-201ENST00000340541 OLFM2O95897 454 aa16.28■□□□□ 0.2
VAPA-201ENST00000340541 TRIM21P19474 475 aaKnown RBP16.28■□□□□ 0.2
VAPA-201ENST00000340541 YWHAQP27348 245 aa16.28■□□□□ 0.2
VAPA-201ENST00000340541 PPP3CCP48454 512 aa16.28■□□□□ 0.2
VAPA-201ENST00000340541 CETN1Q12798 172 aa16.28■□□□□ 0.2
VAPA-201ENST00000340541 IFRD2Q12894 506 aaPredicted RBP16.28■□□□□ 0.2
VAPA-201ENST00000340541 MTAPQ13126 283 aa16.28■□□□□ 0.2
VAPA-201ENST00000340541 ARL14EPQ8N8R7 260 aaPredicted RBP16.28■□□□□ 0.2
VAPA-201ENST00000340541 BPIFB1Q8TDL5 484 aa16.28■□□□□ 0.2
VAPA-201ENST00000340541 ZFYVE19Q96K21 471 aa16.28■□□□□ 0.2
VAPA-201ENST00000340541 HEXIM2Q96MH2 286 aaKnown RBP16.28■□□□□ 0.2
VAPA-201ENST00000340541 INTS2Q9H0H0 1204 aaKnown RBP16.28■□□□□ 0.2
VAPA-201ENST00000340541 C8orf33Q9H7E9 229 aaPredicted RBP16.28■□□□□ 0.2
VAPA-201ENST00000340541 COMMD8Q9NX08 183 aa16.28■□□□□ 0.2
VAPA-201ENST00000340541 DLL3Q9NYJ7 618 aa16.28■□□□□ 0.2
VAPA-201ENST00000340541 TRPM5Q9NZQ8 1165 aa16.28■□□□□ 0.2
VAPA-201ENST00000340541 NCDNQ9UBB6 729 aa16.28■□□□□ 0.2
VAPA-201ENST00000340541 DMXL1Q9Y485 3027 aa16.28■□□□□ 0.2
VAPA-201ENST00000340541 MYO16Q9Y6X6 1858 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 TRAV19A0A0A6YYK7 116 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 DPYSL4O14531 572 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 OAS1P00973 400 aaKnown RBP16.27■□□□□ 0.2
VAPA-201ENST00000340541 USP17L7P0C7H9 530 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 ZDHHC11BP0C7U3 371 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 PFKLP17858 780 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 PGFP49763 221 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 CCR3P51677 355 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 YWHAEP62258 255 aaKnown RBP16.27■□□□□ 0.2
VAPA-201ENST00000340541 ZXDBP98169 803 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 GCNT1Q02742 428 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 ARHGAP29Q52LW3 1261 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 SNX30Q5VWJ9 437 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 RRAGAQ7L523 313 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 DGLUCYQ7Z3D6 616 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 YAF2Q8IY57 180 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 PPM1KQ8N3J5 372 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 DCLK2Q8N568 766 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 CSGALNACT1Q8TDX6 532 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 OVCA2Q8WZ82 227 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 FBXO32Q969P5 355 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 KREMEN1Q96MU8 473 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 SLITRK1Q96PX8 696 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 FAM83CQ9BQN1 747 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 DUSP16Q9BY84 665 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 RNF38Q9H0F5 515 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 KIF9Q9HAQ2 790 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 LMAN1LQ9HAT1 526 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 PNPLA8Q9NP80 782 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 TMEM63CQ9P1W3 806 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 NDRG2Q9UN36 371 aaKnown RBP16.27■□□□□ 0.2
VAPA-201ENST00000340541 PIAS3Q9Y6X2 628 aa16.27■□□□□ 0.2
VAPA-201ENST00000340541 RNF225M0QZC1 329 aaPredicted RBP16.26■□□□□ 0.19
VAPA-201ENST00000340541 CKMP06732 381 aa16.26■□□□□ 0.19
VAPA-201ENST00000340541 HDCP19113 662 aa16.26■□□□□ 0.19
VAPA-201ENST00000340541 USP4Q13107 963 aa16.26■□□□□ 0.19
VAPA-201ENST00000340541 ZNF77Q15935 545 aa16.26■□□□□ 0.19
VAPA-201ENST00000340541 TPD52L1Q16890 204 aaPredicted RBP16.26■□□□□ 0.19
VAPA-201ENST00000340541 CCDC183Q5T5S1 534 aa16.26■□□□□ 0.19
VAPA-201ENST00000340541 C11orf57Q6ZUT1 292 aaPredicted RBP16.26■□□□□ 0.19
VAPA-201ENST00000340541 TTC30AQ86WT1 665 aa16.26■□□□□ 0.19
VAPA-201ENST00000340541 CREBRFQ8IUR6 639 aa16.26■□□□□ 0.19
VAPA-201ENST00000340541 PDZD8Q8NEN9 1154 aa16.26■□□□□ 0.19
VAPA-201ENST00000340541 ZSWIM1Q9BR11 485 aa16.26■□□□□ 0.19
VAPA-201ENST00000340541 CRACR2AQ9BSW2 395 aa16.26■□□□□ 0.19
VAPA-201ENST00000340541 DNAI2Q9GZS0 605 aa16.26■□□□□ 0.19
VAPA-201ENST00000340541 SAMSN1Q9NSI8 373 aaKnown RBP16.26■□□□□ 0.19
VAPA-201ENST00000340541 GMIPQ9P107 970 aa16.26■□□□□ 0.19
VAPA-201ENST00000340541 CHORDC1Q9UHD1 332 aaPredicted RBP16.26■□□□□ 0.19
VAPA-201ENST00000340541 ARHGAP26Q9UNA1 814 aa16.26■□□□□ 0.19
VAPA-201ENST00000340541 PRR5-ARHGAP8B1AHC4 643 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 O00370 1275 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 CHRNB1P11230 501 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 TDGF1P13385 188 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 TCF3P15923 654 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 SLC9A1P19634 815 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 MTIF2P46199 727 aaKnown RBP16.25■□□□□ 0.19
VAPA-201ENST00000340541 ZNF132P52740 706 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 SLC7A9P82251 487 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 ARHGAP8P85298 464 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 MAN2A1Q16706 1144 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 HSP90AA4PQ58FG1 418 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms