RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 HOXB7P09629 217 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 SNRPA1P09661 255 aaKnown RBP13.05□□□□□ -0.32
BRPF3-201ENST00000339717 RCVRNP35243 200 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 NIPAL4Q0D2K0 466 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 LLGL1Q15334 1064 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 CCDC142Q17RM4 750 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 ZBED5Q49AG3 693 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 SPDYAQ5MJ70 313 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 LPCAT4Q643R3 524 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 BORAQ6PGQ7 559 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 LMBR1LQ6UX01 489 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 ISLR2Q6UXK2 745 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 LDHAL6AQ6ZMR3 332 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 CLNKQ7Z7G1 428 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 TPH2Q8IWU9 490 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 LSM14AQ8ND56 463 aaKnown RBP13.05□□□□□ -0.32
BRPF3-201ENST00000339717 TPCN2Q8NHX9 752 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 TNIP3Q96KP6 325 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 CUEDC1Q9NWM3 386 aaPredicted RBP13.05□□□□□ -0.32
BRPF3-201ENST00000339717 EDARQ9UNE0 448 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 PDGFRBP09619 1106 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 POLR2BP30876 1174 aaKnown RBP13.05□□□□□ -0.32
BRPF3-201ENST00000339717 FAM228AQ86W67 206 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 KBTBD8Q8NFY9 601 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 DYRK4Q9NR20 520 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 KCNE2Q9Y6J6 123 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 CAPN8A6NHC0 703 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 ATP5J2-PTCD1G3V325 749 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 CAPN15O75808 1086 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 FGFR2P21802 821 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 XPAP23025 273 aaPredicted RBP13.05□□□□□ -0.32
BRPF3-201ENST00000339717 TIGD2Q4W5G0 525 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 DGLUCYQ7Z3D6 616 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 NECAB2Q7Z6G3 386 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 TLCD1Q96CP7 247 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 GCC2Q8IWJ2 1684 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 TK2O00142 265 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 EDF1O60869 148 aaKnown RBP13.05□□□□□ -0.32
BRPF3-201ENST00000339717 TAGLNQ01995 201 aaKnown RBP13.05□□□□□ -0.32
BRPF3-201ENST00000339717 ANO4Q32M45 955 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 PDPK2PQ6A1A2 396 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 DARS2Q6PI48 645 aaKnown RBP13.05□□□□□ -0.32
BRPF3-201ENST00000339717 GUF1Q8N442 669 aaKnown RBP13.05□□□□□ -0.32
BRPF3-201ENST00000339717 MYCT1Q8N699 235 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 PIK3R3Q92569 461 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 MAGEE1Q9HCI5 957 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 EHD3Q9NZN3 535 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 RGS17Q9UGC6 210 aaPredicted RBP13.05□□□□□ -0.32
BRPF3-201ENST00000339717 GNEQ9Y223 722 aaKnown RBP13.05□□□□□ -0.32
BRPF3-201ENST00000339717 NEO1Q92859 1461 aa13.05□□□□□ -0.32
BRPF3-201ENST00000339717 ARHGEF35A5YM69 484 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 MEI4A8MW99 385 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 TBX10O75333 385 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 CD4P01730 458 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 FOSL2P15408 326 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 CYP7A1P22680 504 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 SLC26A3P40879 764 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 PRKCQQ04759 706 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 SWI5Q1ZZU3 235 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 TIMM50Q3ZCQ8 353 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 TICAM1Q8IUC6 712 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 ZNF564Q8TBZ8 553 aaPredicted RBP13.04□□□□□ -0.32
BRPF3-201ENST00000339717 CATSPERZQ9NTU4 200 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 MCM9Q9NXL9 1143 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 TMEM9Q9P0T7 183 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 PADI4Q9UM07 663 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 HPSEQ9Y251 543 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 PPP1R3GB7ZBB8 358 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 PEX1O43933 1283 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 SSX5O60225 188 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 TMEM253P0C7T8 217 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 MYL4P12829 197 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 RFX1P22670 979 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 HOXD11P31277 338 aaPredicted RBP13.04□□□□□ -0.32
BRPF3-201ENST00000339717 TECP42680 631 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 PRIM2P49643 509 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 COX10Q12887 443 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 NR5A1Q13285 461 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 TP53BP2Q13625 1128 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 TAF5Q15542 800 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 HSD17B12Q53GQ0 312 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 PAGE2BQ5JRK9 111 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 C12orf60Q5U649 245 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 ANKRD13DQ6ZTN6 518 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 TMEM139Q8IV31 216 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 YME1L1Q96TA2 773 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 GTSE1Q9NYZ3 720 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 PKD2L1Q9P0L9 805 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 SYNMO15061 1565 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 KDM6AO15550 1401 aaPredicted RBP13.04□□□□□ -0.32
BRPF3-201ENST00000339717 YTHDC2Q9H6S0 1430 aaKnown RBP13.04□□□□□ -0.32
BRPF3-201ENST00000339717 DNMT1P26358 1616 aaKnown RBP13.04□□□□□ -0.32
BRPF3-201ENST00000339717 TEX51A0A1B0GUA7 166 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 ANXA1P04083 346 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 GARTP22102 1010 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 TCEA1P23193 301 aaKnown RBP13.04□□□□□ -0.32
BRPF3-201ENST00000339717 CASP1P29466 404 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 ARSEP51690 589 aa13.04□□□□□ -0.32
BRPF3-201ENST00000339717 MRPS22P82650 360 aaKnown RBP13.04□□□□□ -0.32
BRPF3-201ENST00000339717 NRF1Q16656 503 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms