RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 TRIM60Q495X7 471 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 MCOLN2Q8IZK6 566 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 PDP2Q9P2J9 529 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 RUVBL2Q9Y230 463 aaKnown RBP12.91□□□□□ -0.34
OTOF-203ENST00000339598 ACOT9Q9Y305 439 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 LRRC10BA6NIK2 292 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 WDR47O94967 919 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 CPA3P15088 417 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 CALB2P22676 271 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 CASP7P55210 303 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 RUNX1T1Q06455 604 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 SEL1L3Q68CR1 1132 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 TMC3Q7Z5M5 1100 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 STRA8Q7Z7C7 330 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 ZNF786Q8N393 782 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 B4GALNT2Q8NHY0 566 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 PCDH9Q9HC56 1237 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 BLOC1S4Q9NUP1 217 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 SCN3BQ9NY72 215 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 DDX20Q9UHI6 824 aaKnown RBP12.91□□□□□ -0.34
OTOF-203ENST00000339598 PNMA8BQ9ULN7 279 aaPredicted RBP12.91□□□□□ -0.34
OTOF-203ENST00000339598 KCNH4Q9UQ05 1017 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 HEATR9A2RTY3 570 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 RARAP10276 462 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 SLC2A3P11169 496 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 TAL1P17542 331 aaPredicted RBP12.9□□□□□ -0.34
OTOF-203ENST00000339598 GCLCP48506 637 aaPredicted RBP12.9□□□□□ -0.34
OTOF-203ENST00000339598 RPL10AP62906 217 aaKnown RBP12.9□□□□□ -0.34
OTOF-203ENST00000339598 C1QBPQ07021 282 aaKnown RBP12.9□□□□□ -0.34
OTOF-203ENST00000339598 MPP3Q13368 585 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 DDX39BQ13838 428 aaKnown RBP12.9□□□□□ -0.34
OTOF-203ENST00000339598 NFIL3Q16649 462 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 DEPDC1Q5TB30 811 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 CD302Q8IX05 232 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 ZSWIM2Q8NEG5 633 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 VPS50Q96JG6 964 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 CNBD2Q96M20 576 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 TRMT6Q9UJA5 497 aaKnown RBP12.9□□□□□ -0.34
OTOF-203ENST00000339598 SHOC2Q9UQ13 582 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 AAR2Q9Y312 384 aaKnown RBP12.9□□□□□ -0.34
OTOF-203ENST00000339598 SNX13Q9Y5W8 968 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 E9PBE3 544 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 PIK3CDO00329 1044 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 RIPK2O43353 540 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 KLHL41O60662 606 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 GYS1P13807 737 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 GRK2P25098 689 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 SERPINB8P50452 374 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 BCAT1P54687 386 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 FBXW4P57775 412 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 DSG1Q02413 1049 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 PAN2Q504Q3 1202 aaKnown RBP12.9□□□□□ -0.34
OTOF-203ENST00000339598 CREG2Q8IUH2 290 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 UNC45BQ8IWX7 931 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 SPIRE2Q8WWL2 714 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 KAT2BQ92831 832 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 TMEM176AQ96HP8 235 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 IARS2Q9NSE4 1012 aaKnown RBP12.9□□□□□ -0.34
OTOF-203ENST00000339598 SPASTQ9UBP0 616 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 RPL21P46778 160 aaKnown RBP12.9□□□□□ -0.34
OTOF-203ENST00000339598 RAP1GAPP47736 663 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 IFI35P80217 286 aaPredicted RBP12.9□□□□□ -0.34
OTOF-203ENST00000339598 ZNF844Q08AG5 666 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 NUDT18Q6ZVK8 323 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 TMCO5AQ8N6Q1 288 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 ELMO3Q96BJ8 720 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 TMEM120AQ9BXJ8 343 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 VPS9D1Q9Y2B5 631 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 ATP11BQ9Y2G3 1177 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 FAM86B1E9PN63 330 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 FAM86B2P0C5J1 330 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 OCM2P0CE71 109 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 OCMP0CE72 109 aaPredicted RBP12.9□□□□□ -0.34
OTOF-203ENST00000339598 NUMBP49757 651 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 ANKS3Q6ZW76 656 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 STX19Q8N4C7 294 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 PLEKHA8Q96JA3 519 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 SH3BP1Q9Y3L3 701 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 E9PCH4 1651 aa12.9□□□□□ -0.34
OTOF-203ENST00000339598 SLITRK3O94933 977 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 VTNP04004 478 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 PSMA4P25789 261 aaKnown RBP12.89□□□□□ -0.35
OTOF-203ENST00000339598 SSTR1P30872 391 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 ELK3P41970 407 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 FUT11Q495W5 492 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 ZNF484Q5JVG2 852 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 KCNK18Q7Z418 384 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 NT5DC3Q86UY8 548 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 WDR49Q8IV35 697 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 CCDC126Q96EE4 140 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 WWOXQ9NZC7 414 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 SPATA31A5Q5VU36 1347 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 SPATA31A7Q8IWB4 1347 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 CYB561D2O14569 222 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 CXCL8P10145 99 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 ZNF157P51786 506 aaPredicted RBP12.89□□□□□ -0.35
OTOF-203ENST00000339598 BNC2Q6ZN30 1099 aaPredicted RBP12.89□□□□□ -0.35
OTOF-203ENST00000339598 ATP6V0D2Q8N8Y2 350 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 GMCL1P1Q8NEA9 526 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 DTNBP1Q96EV8 351 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms