RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 TRIM17Q9Y577 477 aa17.07■□□□□ 0.32
LITAF-201ENST00000339430 ACTL7BQ9Y614 415 aa17.07■□□□□ 0.32
LITAF-201ENST00000339430 A0A1W2PPM1 405 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 KPNA6O60684 536 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 RPL22P35268 128 aaKnown RBP17.06■□□□□ 0.32
LITAF-201ENST00000339430 ZNF200P98182 395 aaPredicted RBP17.06■□□□□ 0.32
LITAF-201ENST00000339430 MMRN1Q13201 1228 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 CCDC142Q17RM4 750 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 FAM102AQ5T9C2 384 aaPredicted RBP17.06■□□□□ 0.32
LITAF-201ENST00000339430 BBS12Q6ZW61 710 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 RMDN2Q96LZ7 410 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 MTG1Q9BT17 334 aaPredicted RBP17.06■□□□□ 0.32
LITAF-201ENST00000339430 PRMT7Q9NVM4 692 aaPredicted RBP17.06■□□□□ 0.32
LITAF-201ENST00000339430 MBLAC1A4D2B0 266 aaPredicted RBP17.06■□□□□ 0.32
LITAF-201ENST00000339430 CILPO75339 1184 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 GRAP2O75791 330 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 INHAP05111 366 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 GSTA1P08263 222 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 PHKA2P46019 1235 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 IL9RQ01113 521 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 TMEM62Q0P6H9 643 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 DNAJC3Q13217 504 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 SNCBQ16143 134 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 NPNTQ6UXI9 565 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 FAM71DQ8N9W8 422 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 NLRP7Q8WX94 980 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 ADPGKQ9BRR6 497 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 PDZD7Q9H5P4 517 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 USP18Q9UMW8 372 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.06■□□□□ 0.32
LITAF-201ENST00000339430 ARL2BPQ9Y2Y0 163 aa17.06■□□□□ 0.32
LITAF-201ENST00000339430 CLUHO75153 1309 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 DNAH12Q6ZR08 3092 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 TREHO43280 583 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 CYP2C9P11712 490 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 RPA3P35244 121 aaPredicted RBP17.05■□□□□ 0.32
LITAF-201ENST00000339430 ELF3P78545 371 aaPredicted RBP17.05■□□□□ 0.32
LITAF-201ENST00000339430 CDO1Q16878 200 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 FAM228AQ86W67 206 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 PPIL6Q8IXY8 311 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 SLAIN1Q8ND83 568 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 CXorf38Q8TB03 319 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 FNIP1Q8TF40 1166 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 PYROXD1Q8WU10 500 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 HPDLQ96IR7 371 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 PIWIL1Q96J94 861 aaKnown RBP17.05■□□□□ 0.32
LITAF-201ENST00000339430 PEBP4Q96S96 227 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 SMC6Q96SB8 1091 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 PITPNM3Q9BZ71 974 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 GRID1Q9ULK0 1009 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 PTCH2Q9Y6C5 1203 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 TRIP11Q15643 1979 aa17.05■□□□□ 0.32
LITAF-201ENST00000339430 RNF8O76064 485 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 ASMTLO95671 621 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 ASGR1P07306 291 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 GRK4P32298 578 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 GPD2P43304 727 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 EIF3EP60228 445 aaKnown RBP17.04■□□□□ 0.32
LITAF-201ENST00000339430 NKX3-2P78367 333 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 ADAM17P78536 824 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 MGAT5Q09328 741 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 ZNF268Q14587 947 aaPredicted RBP17.04■□□□□ 0.32
LITAF-201ENST00000339430 KCNA10Q16322 511 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 AMHR2Q16671 573 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 SLC10A6Q3KNW5 377 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 TDRPQ86YL5 185 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 FITM2Q8N6M3 262 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 NFKBIZQ9BYH8 718 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 ECT2Q9H8V3 914 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 WDR35Q9P2L0 1181 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 GINS2Q9Y248 185 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 C17orf102A2RUQ5 167 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 TMEM63AO94886 807 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 TRUB2O95900 331 aaKnown RBP17.04■□□□□ 0.32
LITAF-201ENST00000339430 ARF4P18085 180 aaPredicted RBP17.04■□□□□ 0.32
LITAF-201ENST00000339430 IBSPP21815 317 aaPredicted RBP17.04■□□□□ 0.32
LITAF-201ENST00000339430 CA4P22748 312 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 BASP1P80723 227 aaKnown RBP17.04■□□□□ 0.32
LITAF-201ENST00000339430 POU5F1BQ06416 359 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 MTFR1Q15390 333 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 KIZQ2M2Z5 673 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 C15orf59Q2T9L4 293 aaPredicted RBP17.04■□□□□ 0.32
LITAF-201ENST00000339430 NBPF20Q3BBV1 942 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 PCGF5Q86SE9 256 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 ZC3H18Q86VM9 953 aaKnown RBP17.04■□□□□ 0.32
LITAF-201ENST00000339430 NAT8LQ8N9F0 302 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 TTC13Q8NBP0 860 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 WDR83Q9BRX9 315 aaKnown RBP17.04■□□□□ 0.32
LITAF-201ENST00000339430 MAK16Q9BXY0 300 aaKnown RBP17.04■□□□□ 0.32
LITAF-201ENST00000339430 PRKAG3Q9UGI9 489 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 CITO14578 2027 aa17.04■□□□□ 0.32
LITAF-201ENST00000339430 CYP3A5P20815 502 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 NDST1P52848 882 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 PRMT2P55345 433 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 ARL4CP56559 192 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 NCALDP61601 193 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 KCNJ2P63252 427 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 NR1H3Q13133 447 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 BBS9Q3SYG4 887 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 TRNP1Q6NT89 227 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms