RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 PXMP2Q9NR77 195 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 TMEM191CA6NGB0 347 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 E5RJQ4 531 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 GOLGA8TH3BQL2 631 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 MTA2O94776 668 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 HSPA4LO95757 839 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 NELFEP18615 380 aaKnown RBP14.71□□□□□ -0.05
PCDH8-201ENST00000338862 ACVR2BQ13705 512 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 VPS72Q15906 364 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 SLFN12LQ6IEE8 588 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 CDHR3Q6ZTQ4 885 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 KDELC2Q7Z4H8 507 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 ZNF677Q86XU0 584 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 DEFB107AQ8IZN7 70 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 NSUN6Q8TEA1 469 aaKnown RBP14.71□□□□□ -0.05
PCDH8-201ENST00000338862 CENPKQ9BS16 269 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 ANKEF1Q9NU02 776 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 ACTL7BQ9Y614 415 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 PEX1O43933 1283 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 ENO3P13929 434 aaPredicted RBP14.7□□□□□ -0.06
PCDH8-201ENST00000338862 NCKAP1LP55160 1127 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 RAB6CQ53S08 254 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 MAP7D3Q8IWC1 876 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 PRPF31Q8WWY3 499 aaKnown RBP14.7□□□□□ -0.06
PCDH8-201ENST00000338862 USP13Q92995 863 aaPredicted RBP14.7□□□□□ -0.06
PCDH8-201ENST00000338862 ZNF333Q96JL9 665 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 CNBD2Q96M20 576 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 RAB6CQ9H0N0 254 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 A6NJR5 290 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 VNN1O95497 513 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 ACADSP16219 412 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 KDELR1P24390 212 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 GCAP28676 217 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 C1QBPQ07021 282 aaKnown RBP14.7□□□□□ -0.06
PCDH8-201ENST00000338862 TMCO4Q5TGY1 634 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 IRGCQ6NXR0 463 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 FAM151AQ8WW52 585 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 MFSD14AQ96MC6 490 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 APOL2Q9BQE5 337 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 ACSS3Q9H6R3 686 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 DDX60Q8IY21 1712 aaKnown RBP14.7□□□□□ -0.06
PCDH8-201ENST00000338862 SPDYE2BA6NHP3 402 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 TTLL13PA6NNM8 815 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 CXorf49A8MYA2 514 aaPredicted RBP14.7□□□□□ -0.06
PCDH8-201ENST00000338862 PRPF4O43172 522 aaKnown RBP eCLIP14.7□□□□□ -0.06
PCDH8-201ENST00000338862 DCXO43602 365 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 CREB3O43889 395 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 USP12O75317 370 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 SORBS2O94875 1100 aaKnown RBP14.7□□□□□ -0.06
PCDH8-201ENST00000338862 SPDYE6P0CI01 402 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 ALADP13716 330 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 ANPEPP15144 967 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 CDKN2BP42772 138 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 AP1B1Q10567 949 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 KLF1Q13351 362 aaPredicted RBP14.7□□□□□ -0.06
PCDH8-201ENST00000338862 ZC3H12AQ5D1E8 599 aaKnown RBP14.7□□□□□ -0.06
PCDH8-201ENST00000338862 APOPT1Q96IL0 206 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 NIF3L1Q9GZT8 377 aa14.7□□□□□ -0.06
PCDH8-201ENST00000338862 QTRT2Q9H974 415 aaKnown RBP14.7□□□□□ -0.06
PCDH8-201ENST00000338862 BHMG1C9JSJ3 638 aaPredicted RBP14.69□□□□□ -0.06
PCDH8-201ENST00000338862 ATP9BO43861 1147 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 NFIL3Q16649 462 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 PTPN20Q4JDL3 420 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 TTC39BQ5VTQ0 682 aaPredicted RBP14.69□□□□□ -0.06
PCDH8-201ENST00000338862 PTAR1Q7Z6K3 402 aaPredicted RBP14.69□□□□□ -0.06
PCDH8-201ENST00000338862 SLC26A11Q86WA9 606 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 ULK2Q8IYT8 1036 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 NRG4Q8WWG1 115 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 ALKBH8Q96BT7 664 aaKnown RBP14.69□□□□□ -0.06
PCDH8-201ENST00000338862 MOCOSQ96EN8 888 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 GJD4Q96KN9 370 aaPredicted RBP14.69□□□□□ -0.06
PCDH8-201ENST00000338862 PGLYRP2Q96PD5 576 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 VCX3AQ9NNX9 186 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 NUMBLQ9Y6R0 609 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 DOT1LQ8TEK3 1739 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 ITGB3P05106 788 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 MMP8P22894 467 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 TRMT10BQ6PF06 316 aaKnown RBP14.69□□□□□ -0.06
PCDH8-201ENST00000338862 TREML1Q86YW5 311 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 B4GALNT2Q8NHY0 566 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 TUBGCP5Q96RT8 1024 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 FOXP3Q9BZS1 431 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 XPNPEP1Q9NQW7 623 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 PPM1HQ9ULR3 514 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 LRP5O75197 1615 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 DCAF8L1A6NGE4 600 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 LDHAP00338 332 aaKnown RBP14.69□□□□□ -0.06
PCDH8-201ENST00000338862 HMGCRP04035 888 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 CXCL8P10145 99 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 GARTP22102 1010 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 CNTN2Q02246 1040 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 GRIK3Q13003 919 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 MAP7Q14244 749 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 FASTKD1Q53R41 847 aaKnown RBP14.69□□□□□ -0.06
PCDH8-201ENST00000338862 XKR3Q5GH77 459 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 PLEKHA7Q6IQ23 1121 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 TMPRSS6Q8IU80 811 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 NIM1KQ8IY84 436 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 TNS4Q8IZW8 715 aa14.69□□□□□ -0.06
PCDH8-201ENST00000338862 RXFP2Q8WXD0 754 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms