RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 TAC1P20366 129 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 ART4Q93070 314 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 WWP1Q9H0M0 922 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 ECT2Q9H8V3 914 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 KLC4Q9NSK0 619 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 PHRF1Q9P1Y6 1649 aaKnown RBP6.54□□□□□ -1.36
PRKDC-202ENST00000338368 CSPG5O95196 566 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 SLC2A14Q8TDB8 520 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 HASPINQ8TF76 798 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 FBXL18Q96ME1 805 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 SMYD3Q9H7B4 428 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 ARF4P18085 180 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-202ENST00000338368 TAF2Q6P1X5 1199 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 JOSD2Q8TAC2 188 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 MICAL1Q8TDZ2 1067 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 DDX27Q96GQ7 796 aaKnown RBP6.54□□□□□ -1.36
PRKDC-202ENST00000338368 NPHS2Q9NP85 383 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 SHOC2Q9UQ13 582 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 KBTBD13C9JR72 458 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 H0Y3Z8 333 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 GHRP10912 638 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 MMP8P22894 467 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 RBL1P28749 1068 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 CORO7P57737 925 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 C15orf59Q2T9L4 293 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-202ENST00000338368 ATP6V1E2Q96A05 226 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 UBN1Q9NPG3 1134 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 PHTF1Q9UMS5 762 aa6.54□□□□□ -1.36
PRKDC-202ENST00000338368 CFAP73A6NFT4 308 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 B4GALT4O60513 344 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 SSTR1P30872 391 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 FLT3P36888 993 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 HIRAP54198 1017 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 HADHBP55084 474 aaKnown RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 USP10Q14694 798 aaKnown RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 TRPM8Q7Z2W7 1104 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 SLC26A11Q86WA9 606 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 CCNYL1Q8N7R7 359 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 RNF157Q96PX1 679 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 VCX3BQ9H321 246 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 PCMTD2Q9NV79 361 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 PAFAH2Q99487 392 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 TRIM56Q9BRZ2 755 aaKnown RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 TSSK1BQ9BXA7 367 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 LRRC52Q8N7C0 313 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 PLEKHO2Q8TD55 490 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 L3MBTL3Q96JM7 780 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 CCDC195A0A1B0GUA6 201 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 FBXO21O94952 628 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 ELK3P41970 407 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 PPM1FP49593 454 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 OVGP1Q12889 678 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 MAP2K5Q13163 448 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 ZNF235Q14590 738 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 MAPRE1Q15691 268 aaKnown RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 MGAT5BQ3V5L5 792 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 PTPN20Q4JDL3 420 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 ZC3H3Q8IXZ2 948 aaKnown RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 PWWP2AQ96N64 755 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 TTC1Q99614 292 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 RPS6KL1Q9Y6S9 549 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 UBA6A0AVT1 1052 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 ODC1P11926 461 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 FKBP1BP68106 108 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 ANO4Q32M45 955 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 MDH1BQ5I0G3 518 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 FBXW10Q5XX13 1052 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 TTC27Q6P3X3 843 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 FAM111AQ96PZ2 611 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 MANSC1Q9H8J5 431 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 SP110Q9HB58 689 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 KCNH4Q9UQ05 1017 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 ANGPTL3Q9Y5C1 460 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 ADGRA3Q8IWK6 1321 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 CCT8L1PA6NM43 557 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 UPP2O95045 317 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 SHBGP04278 402 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 AMPD1P23109 780 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 CYP2F1P24903 491 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 GAD1Q99259 594 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 PGK1P00558 417 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 RPL22P35268 128 aaKnown RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 POLNQ7Z5Q5 900 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 NEUROG2Q9H2A3 272 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 MTIF3Q9H2K0 278 aaKnown RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 DRG1Q9Y295 367 aaKnown RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 UMODL1Q5DID0 1318 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 PPARGP37231 505 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 STX3Q13277 289 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 MON1BQ7L1V2 547 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 ZNF669Q96BR6 464 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 BORCS6Q96GS4 357 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 NR2E1Q9Y466 385 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 PMM2O15305 246 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 CFLARO15519 480 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 LIASO43766 372 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 MSCO60682 206 aa6.53□□□□□ -1.36
PRKDC-202ENST00000338368 ACTN3Q08043 901 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-202ENST00000338368 TRIM67Q6ZTA4 783 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms