RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 MYBL2P10244 700 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 CNTFP26441 200 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 HSPA13P48723 471 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 SERPINB8P50452 374 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 SLC12A3P55017 1021 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 SNAPC2Q13487 334 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 DGKDQ16760 1214 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 CHSY1Q86X52 802 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 FUKQ8N0W3 1084 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 TUBGCP3Q96CW5 907 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 NDUFA13Q9P0J0 144 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 HACL1Q9UJ83 578 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 PRDM4Q9UKN5 801 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 STRA8Q7Z7C7 330 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 CD302Q8IX05 232 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 CHST7Q9NS84 486 aa14.22□□□□□ -0.13
RTN4-202ENST00000337526 RUVBL2Q9Y230 463 aaKnown RBP14.22□□□□□ -0.13
RTN4-202ENST00000337526 FRMPD4Q14CM0 1322 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 MYO1GB0I1T2 1018 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 E9PBE3 544 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 KLHL41O60662 606 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 RHOBTB1O94844 696 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 PPATQ06203 517 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 NFIL3Q16649 462 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 TRMT5Q32P41 509 aaKnown RBP14.21□□□□□ -0.13
RTN4-202ENST00000337526 EFL1Q7Z2Z2 1120 aaKnown RBP14.21□□□□□ -0.13
RTN4-202ENST00000337526 FAM32AQ9Y421 112 aaKnown RBP14.21□□□□□ -0.13
RTN4-202ENST00000337526 ADGRB2O60241 1585 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 AP1G2O75843 785 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 F9P00740 461 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 RAP1GAPP47736 663 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 GCLCP48506 637 aaPredicted RBP14.21□□□□□ -0.13
RTN4-202ENST00000337526 PTK2BQ14289 1009 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 KRT72Q14CN4 511 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 PKN2Q16513 984 aaKnown RBP14.21□□□□□ -0.13
RTN4-202ENST00000337526 GLB1LQ6UWU2 654 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 BNC2Q6ZN30 1099 aaPredicted RBP14.21□□□□□ -0.13
RTN4-202ENST00000337526 APLFQ8IW19 511 aaPredicted RBP14.21□□□□□ -0.13
RTN4-202ENST00000337526 CYP3A43Q9HB55 503 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 AVENQ9NQS1 362 aaPredicted RBP14.21□□□□□ -0.13
RTN4-202ENST00000337526 DNPEPQ9ULA0 475 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 SOX13Q9UN79 622 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 ACOT9Q9Y305 439 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 M0R3G1 203 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 KDM1AO60341 852 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 FKBP6O75344 327 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 DAB1O75553 588 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 ALBP02768 609 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 RPS12P25398 132 aaKnown RBP14.21□□□□□ -0.13
RTN4-202ENST00000337526 AVPR1AP37288 418 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 CASP5P51878 434 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 MTFR1Q15390 333 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 ADCK1Q86TW2 530 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 GPRC5AQ8NFJ5 357 aa14.21□□□□□ -0.13
RTN4-202ENST00000337526 FAM163AQ96GL9 167 aaPredicted RBP14.21□□□□□ -0.13
RTN4-202ENST00000337526 PRPF18Q99633 342 aaKnown RBP14.21□□□□□ -0.13
RTN4-202ENST00000337526 DDX28Q9NUL7 540 aaKnown RBP14.21□□□□□ -0.13
RTN4-202ENST00000337526 CLASP2O75122 1294 aaKnown RBP14.21□□□□□ -0.14
RTN4-202ENST00000337526 JCHAINP01591 159 aa14.21□□□□□ -0.14
RTN4-202ENST00000337526 BCAT1P54687 386 aa14.21□□□□□ -0.14
RTN4-202ENST00000337526 CCDC85BQ15834 202 aaPredicted RBP14.21□□□□□ -0.14
RTN4-202ENST00000337526 IZUMO2Q6UXV1 221 aa14.21□□□□□ -0.14
RTN4-202ENST00000337526 TMPRSS6Q8IU80 811 aa14.21□□□□□ -0.14
RTN4-202ENST00000337526 DCP1BQ8IZD4 617 aaKnown RBP14.21□□□□□ -0.14
RTN4-202ENST00000337526 ECSITQ9BQ95 431 aa14.21□□□□□ -0.14
RTN4-202ENST00000337526 DDX4Q9NQI0 724 aaKnown RBP14.21□□□□□ -0.14
RTN4-202ENST00000337526 AAR2Q9Y312 384 aaKnown RBP14.21□□□□□ -0.14
RTN4-202ENST00000337526 SNX13Q9Y5W8 968 aa14.21□□□□□ -0.14
RTN4-202ENST00000337526 TMEM150BA6NC51 233 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 VCAM1P19320 739 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 HLA-DPA1P20036 260 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 KCNA4P22459 653 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 GEMP55040 296 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 POU4F1Q01851 419 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 MPP3Q13368 585 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 SGO1Q5FBB7 561 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 SPIRE2Q8WWL2 714 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 SOAT2O75908 522 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 B3GAT3O94766 335 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 FSBPO95073 299 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 CYP2B6P20813 491 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 AKT1P31749 480 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 MRNIPQ6NTE8 343 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 UNC45BQ8IWX7 931 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 KAT5Q92993 513 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 CCDC126Q96EE4 140 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 IARS2Q9NSE4 1012 aaKnown RBP14.2□□□□□ -0.14
RTN4-202ENST00000337526 FCHO1O14526 889 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 VIL1P09327 827 aaKnown RBP14.2□□□□□ -0.14
RTN4-202ENST00000337526 MGAT5Q09328 741 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 TAF1CQ15572 869 aaPredicted RBP14.2□□□□□ -0.14
RTN4-202ENST00000337526 MGAT5BQ3V5L5 792 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 SNX30Q5VWJ9 437 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 PLD3Q8IV08 490 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 ZNF786Q8N393 782 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 ZSWIM2Q8NEG5 633 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 FAR2Q96K12 515 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 TMEM237Q96Q45 408 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 MUC3BQ9H195 1237 aa14.2□□□□□ -0.14
RTN4-202ENST00000337526 NCKIPSDQ9NZQ3 722 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms