RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 C1orf228Q6PIY5 440 aa21.51■■□□□ 1.03
SPNS1-203ENST00000334536 TMEM270Q6UE05 265 aa21.51■■□□□ 1.03
SPNS1-203ENST00000334536 FEZF2Q8TBJ5 459 aa21.51■■□□□ 1.03
SPNS1-203ENST00000334536 NMD3Q96D46 503 aaKnown RBP21.51■■□□□ 1.03
SPNS1-203ENST00000334536 PRICKLE1Q96MT3 831 aaPredicted RBP21.51■■□□□ 1.03
SPNS1-203ENST00000334536 HNRNPABQ99729 332 aaKnown RBP21.51■■□□□ 1.03
SPNS1-203ENST00000334536 CCDC77Q9BR77 488 aa21.51■■□□□ 1.03
SPNS1-203ENST00000334536 MSTO1Q9BUK6 570 aa21.51■■□□□ 1.03
SPNS1-203ENST00000334536 NINJ2Q9NZG7 142 aa21.51■■□□□ 1.03
SPNS1-203ENST00000334536 HACL1Q9UJ83 578 aa21.51■■□□□ 1.03
SPNS1-203ENST00000334536 SMG5Q9UPR3 1016 aaKnown RBP21.51■■□□□ 1.03
SPNS1-203ENST00000334536 PTPRJQ12913 1337 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 ARHGAP10A1A4S6 786 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 E9PBE3 544 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 THAP12O43422 761 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 HAUS5O94927 633 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 GEMIN4P57678 1058 aaKnown RBP21.5■■□□□ 1.03
SPNS1-203ENST00000334536 TAS2R40P59535 323 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 BCL2A1Q16548 175 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 BORAQ6PGQ7 559 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 CATSPERGQ6ZRH7 1159 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 RCOR2Q8IZ40 523 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 BBS5Q8N3I7 341 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 TMEM143Q96AN5 459 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 FAM84AQ96KN4 292 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 EIF2AQ9BY44 585 aaKnown RBP21.5■■□□□ 1.03
SPNS1-203ENST00000334536 HAPLN2Q9GZV7 340 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 DMTF1Q9Y222 760 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 SIP14410 1827 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 ZNF541Q9H0D2 1346 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 WDR4P57081 412 aaKnown RBP21.5■■□□□ 1.03
SPNS1-203ENST00000334536 STAT4Q14765 748 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 TMEM53Q6P2H8 277 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 Q6ZNX1 250 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 DTX3LQ8TDB6 740 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 ZFRQ96KR1 1074 aaKnown RBP21.5■■□□□ 1.03
SPNS1-203ENST00000334536 TTC25Q96NG3 672 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 SENP1Q9P0U3 644 aa21.5■■□□□ 1.03
SPNS1-203ENST00000334536 COL11A1P12107 1806 aaPredicted RBP21.49■■□□□ 1.03
SPNS1-203ENST00000334536 ADGRA2Q96PE1 1338 aa21.49■■□□□ 1.03
SPNS1-203ENST00000334536 CNTNAP2Q9UHC6 1331 aa21.49■■□□□ 1.03
SPNS1-203ENST00000334536 LRRIQ4A6NIV6 560 aa21.49■■□□□ 1.03
SPNS1-203ENST00000334536 TLR3O15455 904 aaKnown RBP21.49■■□□□ 1.03
SPNS1-203ENST00000334536 FKBP6O75344 327 aa21.49■■□□□ 1.03
SPNS1-203ENST00000334536 GRIA2P42262 883 aa21.49■■□□□ 1.03
SPNS1-203ENST00000334536 TGFB2P61812 414 aa21.49■■□□□ 1.03
SPNS1-203ENST00000334536 NOP14P78316 857 aaKnown RBP21.49■■□□□ 1.03
SPNS1-203ENST00000334536 GRM1Q13255 1194 aa21.49■■□□□ 1.03
SPNS1-203ENST00000334536 TRIP13Q15645 432 aaPredicted RBP21.49■■□□□ 1.03
SPNS1-203ENST00000334536 STXBP2Q15833 593 aa21.49■■□□□ 1.03
SPNS1-203ENST00000334536 TMCO4Q5TGY1 634 aa21.49■■□□□ 1.03
SPNS1-203ENST00000334536 LRRC38Q5VT99 294 aa21.49■■□□□ 1.03
SPNS1-203ENST00000334536 LLGL2Q6P1M3 1020 aa21.49■■□□□ 1.03
SPNS1-203ENST00000334536 DRICH1Q6PGQ1 229 aaPredicted RBP21.49■■□□□ 1.03
SPNS1-203ENST00000334536 PDSS2Q86YH6 399 aa21.49■■□□□ 1.03
SPNS1-203ENST00000334536 DNERQ8NFT8 737 aa21.49■■□□□ 1.03
SPNS1-203ENST00000334536 DENND1AQ8TEH3 1009 aa21.49■■□□□ 1.03
SPNS1-203ENST00000334536 HEMGNQ9BXL5 484 aa21.49■■□□□ 1.03
SPNS1-203ENST00000334536 PPP1R1BQ9UD71 204 aaPredicted RBP21.49■■□□□ 1.03
SPNS1-203ENST00000334536 ZNHIT2Q9UHR6 403 aa21.49■■□□□ 1.03
SPNS1-203ENST00000334536 EFR3BQ9Y2G0 817 aa21.49■■□□□ 1.03
SPNS1-203ENST00000334536 VILLO15195 856 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 ABHD2P08910 425 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 ZNF132P52740 706 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 HMGCS2P54868 508 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 DNAJC3Q13217 504 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 IZUMO3Q5VZ72 239 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 AAGABQ6PD74 315 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 SATL1Q86VE3 508 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 UBR7Q8N806 425 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 SLC7A3Q8WY07 619 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 VPS50Q96JG6 964 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 ZBTB45Q96K62 511 aaPredicted RBP21.48■■□□□ 1.03
SPNS1-203ENST00000334536 USP29Q9HBJ7 922 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 ARHGEF38Q9NXL2 777 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 HOXC10Q9NYD6 342 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 EURLQ9NYK6 297 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 CLIC5Q9NZA1 410 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 FADS3Q9Y5Q0 445 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 WASF2Q9Y6W5 498 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 IGKV6D-21A0A0A0MT36 114 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 MATN2O00339 956 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 PDE5AO76074 875 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 CFHP08603 1231 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 UQCRBP14927 111 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 KLRC2P26717 231 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 THOC5Q13769 683 aaKnown RBP21.48■■□□□ 1.03
SPNS1-203ENST00000334536 MICALL2Q8IY33 904 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 OR6Y1Q8NGX8 325 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 TARS2Q9BW92 718 aaKnown RBP21.48■■□□□ 1.03
SPNS1-203ENST00000334536 NRDE2Q9H7Z3 1164 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 PFDN4Q9NQP4 134 aa21.48■■□□□ 1.03
SPNS1-203ENST00000334536 LSM8O95777 96 aaKnown RBP21.47■■□□□ 1.03
SPNS1-203ENST00000334536 CALB1P05937 261 aa21.47■■□□□ 1.03
SPNS1-203ENST00000334536 MMP8P22894 467 aa21.47■■□□□ 1.03
SPNS1-203ENST00000334536 SP2Q02086 613 aa21.47■■□□□ 1.03
SPNS1-203ENST00000334536 NFX1Q12986 1120 aaKnown RBP21.47■■□□□ 1.03
SPNS1-203ENST00000334536 NCOA4Q13772 614 aa21.47■■□□□ 1.03
SPNS1-203ENST00000334536 C2CD6Q53TS8 623 aa21.47■■□□□ 1.03
SPNS1-203ENST00000334536 WRNIP1Q96S55 665 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms