RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 CKBP12277 381 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 CRYBB1P53674 252 aaPredicted RBP15.57■□□□□ 0.08
C9orf47-201ENST00000334490 RHOAP61586 193 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 DLG4P78352 724 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 MAPK7Q13164 816 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 SPOCD1Q6ZMY3 1216 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 EXD1Q8NHP7 514 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 ZNF558Q96NG5 402 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 BTBD7Q9P203 1132 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 PLA2G4CQ9UP65 541 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 KNDC1Q76NI1 1749 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 C2orf81A6NN90 581 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 SNRPAP09012 282 aaKnown RBP15.57■□□□□ 0.08
C9orf47-201ENST00000334490 HSPA9P38646 679 aaKnown RBP15.57■□□□□ 0.08
C9orf47-201ENST00000334490 ADAM32Q8TC27 787 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 LPPQ93052 612 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 FTHL17Q9BXU8 183 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 IGFLR1Q9H665 355 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 RRN3Q9NYV6 651 aa15.57■□□□□ 0.08
C9orf47-201ENST00000334490 SMG5Q9UPR3 1016 aaKnown RBP15.57■□□□□ 0.08
C9orf47-201ENST00000334490 AAR2Q9Y312 384 aaKnown RBP15.57■□□□□ 0.08
C9orf47-201ENST00000334490 LZTS3O60299 673 aaPredicted RBP15.56■□□□□ 0.08
C9orf47-201ENST00000334490 CCDC130P13994 396 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 IFNA8P32881 189 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 IL17AQ16552 155 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 PPM1LQ5SGD2 360 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 MEI1Q5TIA1 1274 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 PALB2Q86YC2 1186 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 CNPY4Q8N129 248 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 OR2W6PQ8NHA6 318 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 LRRC37BQ96QE4 947 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 ACO2Q99798 780 aaKnown RBP15.56■□□□□ 0.08
C9orf47-201ENST00000334490 UBXN6Q9BZV1 441 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 ROBO3Q96MS0 1386 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 XYLBO75191 536 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 TGM2P21980 687 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 KCNA4P22459 653 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 SLC8A1P32418 973 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 PCBP1Q15365 356 aaKnown RBP eCLIP15.56■□□□□ 0.08
C9orf47-201ENST00000334490 DEFB106AQ8N104 65 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 MMGT1Q8N4V1 131 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 FRMD8P1Q9BZ68 369 aaPredicted RBP15.56■□□□□ 0.08
C9orf47-201ENST00000334490 ISCUQ9H1K1 167 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 EML4Q9HC35 981 aaKnown RBP15.56■□□□□ 0.08
C9orf47-201ENST00000334490 PCDHGB4Q9UN71 923 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.56■□□□□ 0.08
C9orf47-201ENST00000334490 USH1CQ9Y6N9 552 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 B4GALT5O43286 388 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 ITGA7Q13683 1181 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 PTK2BQ14289 1009 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 NOMO2Q5JPE7 1267 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 AMIGO3Q86WK7 504 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 HELQQ8TDG4 1101 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 APOL2Q9BQE5 337 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.56■□□□□ 0.08
C9orf47-201ENST00000334490 SLC39A10Q9ULF5 831 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 IPPQ9Y573 584 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 SLIT2O94813 1529 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 A0A0A6YYK5 440 aaPredicted RBP15.56■□□□□ 0.08
C9orf47-201ENST00000334490 RNASEH1O60930 286 aaKnown RBP15.56■□□□□ 0.08
C9orf47-201ENST00000334490 ADRB2P07550 413 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 ANKRD20A4Q4UJ75 823 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 ANKRD20A8PQ5CZ79 823 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 ANKRD20A2Q5SQ80 823 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 ANKRD20A1Q5TYW2 823 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 EEF1DP3Q658K8 133 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 ZDHHC17Q8IUH5 632 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 TBC1D19Q8N5T2 526 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 KAT5Q92993 513 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 SMYD3Q9H7B4 428 aa15.56■□□□□ 0.08
C9orf47-201ENST00000334490 PPFIA2O75334 1257 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 RHOBTB1O94844 696 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 RTN3O95197 1032 aaPredicted RBP15.55■□□□□ 0.08
C9orf47-201ENST00000334490 IGFBP4P22692 258 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 CSE1LP55060 971 aaKnown RBP15.55■□□□□ 0.08
C9orf47-201ENST00000334490 SNCBQ16143 134 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 TFAP2DQ7Z6R9 452 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 ACTL9Q8TC94 416 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 GPR20Q99678 358 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 FAM47DPA6NHR8 397 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 AMPD2Q01433 879 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 PLD1Q13393 1074 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 DLK2Q6UY11 383 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 REM2Q8IYK8 340 aaPredicted RBP15.55■□□□□ 0.08
C9orf47-201ENST00000334490 CELF6Q96J87 481 aaKnown RBP15.55■□□□□ 0.08
C9orf47-201ENST00000334490 VCPIP1Q96JH7 1222 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 SERPINB11Q96P15 392 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 CD274Q9NZQ7 290 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 NUDT5Q9UKK9 219 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 SHPRHQ149N8 1683 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 TTC36A6NLP5 189 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 PTPN1P18031 435 aaKnown RBP15.55■□□□□ 0.08
C9orf47-201ENST00000334490 ARL4DP49703 201 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 ERMARDQ5T6L9 678 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 ABHD15Q6UXT9 468 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 TMEM121Q9BTD3 319 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 PPCSQ9HAB8 311 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 NT5MQ9NPB1 228 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 MRPL17Q9NRX2 175 aaKnown RBP15.55■□□□□ 0.08
C9orf47-201ENST00000334490 FZD9O00144 591 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms