RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 SORBS2O94875 1100 aaKnown RBP12.34□□□□□ -0.43
LIMK2-202ENST00000333611 BGNP21810 368 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 DMP1Q13316 513 aaPredicted RBP12.34□□□□□ -0.43
LIMK2-202ENST00000333611 ITGADQ13349 1161 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 EFTUD2Q15029 972 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■■■■■ 27.4
LIMK2-202ENST00000333611 INAQ16352 499 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 PERM1Q5SV97 790 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 C1orf220Q5T0J3 134 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 PRMT6Q96LA8 375 aaPredicted RBP12.34□□□□□ -0.43
LIMK2-202ENST00000333611 LRGUKQ96M69 825 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 PANX3Q96QZ0 392 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 GPC6Q9Y625 555 aaPredicted RBP12.34□□□□□ -0.43
LIMK2-202ENST00000333611 PIK3R2O00459 728 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 KRT75O95678 551 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 GZMAP12544 262 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 QARSP47897 775 aaKnown RBP12.33□□□□□ -0.44
LIMK2-202ENST00000333611 SMTNL2Q2TAL5 461 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 BBS9Q3SYG4 887 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 HHIPL2Q6UWX4 724 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 XKR5Q6UX68 686 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 DHDDSQ86SQ9 333 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 CTAGE3PQ8IX95 158 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 SP8Q8IXZ3 490 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.33□□□□□ -0.44
LIMK2-202ENST00000333611 SACM1LQ9NTJ5 587 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 USP21Q9UK80 565 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 CROTQ9UKG9 612 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 DNPEPQ9ULA0 475 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 AGTPBP1Q9UPW5 1226 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 SPO11Q9Y5K1 396 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 P4HBP07237 508 aaKnown RBP12.33□□□□□ -0.44
LIMK2-202ENST00000333611 TCF4P15884 667 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 CDH3P22223 829 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 RFX1P22670 979 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 ARL4CP56559 192 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 GEMIN4P57678 1058 aaKnown RBP12.33□□□□□ -0.44
LIMK2-202ENST00000333611 MTMR1Q13613 665 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 LIN9Q5TKA1 542 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 CDAN1Q8IWY9 1227 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 PSPC1Q8WXF1 523 aaKnown RBP12.33□□□□□ -0.44
LIMK2-202ENST00000333611 SHC3Q92529 594 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 HPS1Q92902 700 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 CD101Q93033 1021 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 CEP170P1Q96L14 293 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 CFAP57Q96MR6 1250 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 ACAP3Q96P50 834 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 GPATCH1Q9BRR8 931 aaKnown RBP12.33□□□□□ -0.44
LIMK2-202ENST00000333611 TMEM121Q9BTD3 319 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 INPP5FQ9Y2H2 1132 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 TMED5Q9Y3A6 229 aa12.33□□□□□ -0.44
LIMK2-202ENST00000333611 I3L4J1 428 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 FSCN2O14926 492 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 ECE2O60344 883 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 NCF2P19878 526 aaPredicted RBP12.32□□□□□ -0.44
LIMK2-202ENST00000333611 TCN1P20061 433 aaPredicted RBP12.32□□□□□ -0.44
LIMK2-202ENST00000333611 SSTR1P30872 391 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 TMPRSS15P98073 1019 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 RALGDSQ12967 914 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 CRY2Q49AN0 593 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 BRDTQ58F21 947 aaPredicted RBP12.32□□□□□ -0.44
LIMK2-202ENST00000333611 C6orf52Q5T4I8 152 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 EGFLAMQ63HQ2 1017 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 FAM111AQ96PZ2 611 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 ZBED2Q9BTP6 218 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 MANSC1Q9H8J5 431 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 RAVER2Q9HCJ3 691 aaKnown RBP12.32□□□□□ -0.44
LIMK2-202ENST00000333611 NDUFA13Q9P0J0 144 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 THEGQ9P2T0 379 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 SLC7A8Q9UHI5 535 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 NUMBLQ9Y6R0 609 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 A0A1W2PQ67 120 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 CYP1A2P05177 515 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 TKTP29401 623 aaKnown RBP12.32□□□□□ -0.44
LIMK2-202ENST00000333611 NEK2P51955 445 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 AOC3Q16853 763 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 TRIM16LQ309B1 348 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 TMPRSS6Q8IU80 811 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.32□□□□□ -0.44
LIMK2-202ENST00000333611 GINM1Q9NU53 330 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 ARHGAP26Q9UNA1 814 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 VILLO15195 856 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 TCEA1P23193 301 aaKnown RBP12.32□□□□□ -0.44
LIMK2-202ENST00000333611 VCPP55072 806 aaKnown RBP12.32□□□□□ -0.44
LIMK2-202ENST00000333611 ACVR2BQ13705 512 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 STAT4Q14765 748 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 NRF1Q16656 503 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 CLEC16AQ2KHT3 1053 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 LDLRAP1Q5SW96 308 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 RSPH3Q86UC2 560 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 MCOLN2Q8IZK6 566 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 HELQQ8TDG4 1101 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 CHURC1Q8WUH1 139 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 TMIGD2Q96BF3 282 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 GMCL1Q96IK5 515 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 PPP1R10Q96QC0 940 aaKnown RBP12.32□□□□□ -0.44
LIMK2-202ENST00000333611 MXRA8Q9BRK3 442 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 KIAA1586Q9HCI6 787 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 PCDH12Q9NPG4 1184 aa12.32□□□□□ -0.44
LIMK2-202ENST00000333611 TNRC6CQ9HCJ0 1690 aaKnown RBP12.32□□□□□ -0.44
LIMK2-202ENST00000333611 ATP2A1O14983 1001 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms