RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 PAAF1Q9BRP4 392 aa16.61■□□□□ 0.25
PGBD2-201ENST00000329291 TSPYL2Q9H2G4 693 aaPredicted RBP16.61■□□□□ 0.25
PGBD2-201ENST00000329291 CHST12Q9NRB3 414 aa16.61■□□□□ 0.25
PGBD2-201ENST00000329291 ARL5CA6NH57 179 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 CABYRO75952 493 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 BEST1O76090 585 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 WARSP23381 471 aaKnown RBP16.6■□□□□ 0.25
PGBD2-201ENST00000329291 CD52P31358 61 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 SLCO1A2P46721 670 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 RPL34P49207 117 aaKnown RBP16.6■□□□□ 0.25
PGBD2-201ENST00000329291 ATXN1P54253 815 aaKnown RBP16.6■□□□□ 0.25
PGBD2-201ENST00000329291 CDH6P55285 790 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 IFI35P80217 286 aaPredicted RBP16.6■□□□□ 0.25
PGBD2-201ENST00000329291 LMNB2Q03252 620 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 BST2Q10589 180 aaKnown RBP16.6■□□□□ 0.25
PGBD2-201ENST00000329291 GPS1Q13098 491 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 CA9Q16790 459 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 TRMT10CQ7L0Y3 403 aaKnown RBP16.6■□□□□ 0.25
PGBD2-201ENST00000329291 FUKQ8N0W3 1084 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 B3GALNT2Q8NCR0 500 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 C3orf58Q8NDZ4 430 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 PXYLP1Q8TE99 480 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 TLCD1Q96CP7 247 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 ZMYND15Q9H091 742 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 NGRNQ9NPE2 291 aaKnown RBP16.6■□□□□ 0.25
PGBD2-201ENST00000329291 DPYSL4O14531 572 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 GPR182O15218 404 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 IBSPP21815 317 aaPredicted RBP16.6■□□□□ 0.25
PGBD2-201ENST00000329291 CLCNKBP51801 687 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 RABGGTBP53611 331 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 BCAT1P54687 386 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 NRLP54845 237 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 HDAC4P56524 1084 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 CAV1Q03135 178 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 DPYSL3Q14195 570 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 UNC45BQ8IWX7 931 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 TOP6BLQ8N6T0 577 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 PADI3Q9ULW8 664 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 NOD1Q9Y239 953 aa16.6■□□□□ 0.25
PGBD2-201ENST00000329291 TIMM13Q9Y5L4 95 aaPredicted RBP16.6■□□□□ 0.25
PGBD2-201ENST00000329291 SGK1O00141 431 aa16.59■□□□□ 0.25
PGBD2-201ENST00000329291 PRPSAP2O60256 369 aa16.59■□□□□ 0.25
PGBD2-201ENST00000329291 IFNB1P01574 187 aa16.59■□□□□ 0.25
PGBD2-201ENST00000329291 SCNN1GP51170 649 aa16.59■□□□□ 0.25
PGBD2-201ENST00000329291 ITGA7Q13683 1181 aa16.59■□□□□ 0.25
PGBD2-201ENST00000329291 SENP8Q96LD8 212 aa16.59■□□□□ 0.25
PGBD2-201ENST00000329291 TRMT13Q9NUP7 481 aaKnown RBP16.59■□□□□ 0.25
PGBD2-201ENST00000329291 NINJ2Q9NZG7 142 aa16.59■□□□□ 0.25
PGBD2-201ENST00000329291 CALCOCO1Q9P1Z2 691 aa16.59■□□□□ 0.25
PGBD2-201ENST00000329291 DNALI1O14645 258 aaPredicted RBP16.58■□□□□ 0.25
PGBD2-201ENST00000329291 GABRDO14764 452 aa16.58■□□□□ 0.25
PGBD2-201ENST00000329291 EIF3HO15372 352 aaKnown RBP eCLIP16.58■□□□□ 0.25
PGBD2-201ENST00000329291 TTC4O95801 387 aa16.58■□□□□ 0.25
PGBD2-201ENST00000329291 GHRP10912 638 aa16.58■□□□□ 0.25
PGBD2-201ENST00000329291 PTPN1P18031 435 aaKnown RBP16.58■□□□□ 0.25
PGBD2-201ENST00000329291 SDC4P31431 198 aa16.58■□□□□ 0.25
PGBD2-201ENST00000329291 ARHGEF6Q15052 776 aa16.58■□□□□ 0.25
PGBD2-201ENST00000329291 LEKR1Q6ZMV7 388 aa16.58■□□□□ 0.25
PGBD2-201ENST00000329291 C11orf84Q9BUA3 381 aaPredicted RBP16.58■□□□□ 0.25
PGBD2-201ENST00000329291 TMEM109Q9BVC6 243 aa16.58■□□□□ 0.25
PGBD2-201ENST00000329291 SLC12A6Q9UHW9 1150 aa16.58■□□□□ 0.25
PGBD2-201ENST00000329291 THSD7BQ9C0I4 1608 aa16.58■□□□□ 0.24
PGBD2-201ENST00000329291 MDH1P40925 334 aaKnown RBP16.58■□□□□ 0.24
PGBD2-201ENST00000329291 PTK7Q13308 1070 aa16.58■□□□□ 0.24
PGBD2-201ENST00000329291 MRPL10Q7Z7H8 261 aaKnown RBP16.58■□□□□ 0.24
PGBD2-201ENST00000329291 ZCCHC9Q8N567 271 aaKnown RBP16.58■□□□□ 0.24
PGBD2-201ENST00000329291 TAB3Q8N5C8 712 aaPredicted RBP16.58■□□□□ 0.24
PGBD2-201ENST00000329291 PGM2Q96G03 612 aa16.58■□□□□ 0.24
PGBD2-201ENST00000329291 HNRNPABQ99729 332 aaKnown RBP16.58■□□□□ 0.24
PGBD2-201ENST00000329291 RSAD1Q9HA92 442 aa16.58■□□□□ 0.24
PGBD2-201ENST00000329291 TPX2Q9ULW0 747 aaKnown RBP16.58■□□□□ 0.24
PGBD2-201ENST00000329291 THP07101 528 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 NDUFV1P49821 464 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 ACLYP53396 1101 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 GAD2Q05329 585 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 AUHQ13825 339 aaKnown RBP16.57■□□□□ 0.24
PGBD2-201ENST00000329291 LPIN1Q14693 890 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 LONRF1Q17RB8 773 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 HP1BP3Q5SSJ5 553 aaPredicted RBP16.57■□□□□ 0.24
PGBD2-201ENST00000329291 SLC26A9Q7LBE3 791 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 PIGZQ86VD9 579 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 PQLC3Q8N755 202 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 FAM71DQ8N9W8 422 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 RNF169Q8NCN4 708 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 BBOF1Q8ND07 529 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 TNIP3Q96KP6 325 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 C9orf72Q96LT7 481 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 SNRNP25Q9BV90 132 aaKnown RBP16.57■□□□□ 0.24
PGBD2-201ENST00000329291 DNAI2Q9GZS0 605 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 CRTAC1Q9NQ79 661 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 CASTOR2A6NHX0 329 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 FOXO6A8MYZ6 492 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 APOC4-APOC2K7ER74 178 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 APOC2P02655 101 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 RPL22P35268 128 aaKnown RBP16.57■□□□□ 0.24
PGBD2-201ENST00000329291 VEGFBP49765 207 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 EIF3EP60228 445 aaKnown RBP16.57■□□□□ 0.24
PGBD2-201ENST00000329291 PPP2R2AP63151 447 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 BOLA3Q53S33 107 aa16.57■□□□□ 0.24
PGBD2-201ENST00000329291 MDH1BQ5I0G3 518 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms