RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 BTBD7Q9P203 1132 aa13.69□□□□□ -0.22
CLGN-201ENST00000325617 GPR25O00155 361 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 GYG2O15488 501 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 TOM1L1O75674 476 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 MICAL2O94851 1124 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 FARP2O94887 1054 aaPredicted RBP13.68□□□□□ -0.22
CLGN-201ENST00000325617 ZBTB7AO95365 584 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 LDHAP00338 332 aaKnown RBP13.68□□□□□ -0.22
CLGN-201ENST00000325617 HMGCRP04035 888 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 TROVE2P10155 538 aaKnown RBP eCLIP13.68□□□□□ -0.22
CLGN-201ENST00000325617 MCCD1P59942 119 aaPredicted RBP13.68□□□□□ -0.22
CLGN-201ENST00000325617 HSF5Q4G112 596 aaPredicted RBP13.68□□□□□ -0.22
CLGN-201ENST00000325617 TDRPQ86YL5 185 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 VPS52Q8N1B4 723 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 CYTH2Q99418 400 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 PPP1R12CQ9BZL4 782 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 MIS12Q9H081 205 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 FAM49BQ9NUQ9 324 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 TAS2R1Q9NYW7 299 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 SORBS2O94875 1100 aaKnown RBP13.68□□□□□ -0.22
CLGN-201ENST00000325617 LINGO3P0C6S8 592 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 CYP3A5P20815 502 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 PTPN4P29074 926 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 RTP1P59025 263 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 MCL1Q07820 350 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 BBS12Q6ZW61 710 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 ARID3BQ8IVW6 561 aaPredicted RBP13.68□□□□□ -0.22
CLGN-201ENST00000325617 SPNS2Q8IVW8 549 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 MAB21L3Q8N8X9 362 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 RXFP2Q8WXD0 754 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 USP6NLQ92738 828 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 MOCOSQ96EN8 888 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 SYT15Q9BQS2 421 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 ADPGKQ9BRR6 497 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 TRIM55Q9BYV6 548 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 SLC24A2Q9UI40 661 aa13.68□□□□□ -0.22
CLGN-201ENST00000325617 SOWAHBA6NEL2 793 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 H3BRJ5 948 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 C2CD2LO14523 706 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 MCF2LO15068 1137 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 OGTO15294 1046 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 SMNDC1O75940 238 aaKnown RBP eCLIP13.67□□□□□ -0.22
CLGN-201ENST00000325617 USP1O94782 785 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 PEX6Q13608 980 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 C4orf50Q6ZRC1 276 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 HACE1Q8IYU2 909 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 C1orf127Q8N9H9 656 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 SLC4A11Q8NBS3 891 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 MRPL4Q9BYD3 311 aaKnown RBP13.67□□□□□ -0.22
CLGN-201ENST00000325617 PCMTD2Q9NV79 361 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 PPARGC1AQ9UBK2 798 aaKnown RBP13.67□□□□□ -0.22
CLGN-201ENST00000325617 SIGLEC16A6NMB1 481 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 LACTBL1A8MY62 500 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 FCHO1O14526 889 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 GSC2O15499 205 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 DKC1O60832 514 aaKnown RBP eCLIP13.67□□□□□ -0.22
CLGN-201ENST00000325617 LYPLA1O75608 230 aaPredicted RBP13.67□□□□□ -0.22
CLGN-201ENST00000325617 PDGFRAP16234 1089 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 PHBP35232 272 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 ALDH18A1P54886 795 aaKnown RBP13.67□□□□□ -0.22
CLGN-201ENST00000325617 ZNF200P98182 395 aaPredicted RBP13.67□□□□□ -0.22
CLGN-201ENST00000325617 CCDC15Q0P6D6 951 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 OLIG2Q13516 323 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 THOC5Q13769 683 aaKnown RBP13.67□□□□□ -0.22
CLGN-201ENST00000325617 HADHQ16836 314 aaKnown RBP13.67□□□□□ -0.22
CLGN-201ENST00000325617 LRRC36Q1X8D7 754 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 MUM1Q2TAK8 710 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 JADE1Q6IE81 842 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 WDR49Q8IV35 697 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 SCUBE3Q8IX30 993 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.67□□□□□ -0.22
CLGN-201ENST00000325617 MCUR1Q96AQ8 359 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 SRPK1Q96SB4 655 aaKnown RBP13.67□□□□□ -0.22
CLGN-201ENST00000325617 EBF4Q9BQW3 602 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 NMRK1Q9NWW6 199 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 CPSF3Q9UKF6 684 aaKnown RBP13.67□□□□□ -0.22
CLGN-201ENST00000325617 MRPL42Q9Y6G3 142 aaKnown RBP13.67□□□□□ -0.22
CLGN-201ENST00000325617 POLR2AP24928 1970 aaKnown RBP13.67□□□□□ -0.22
CLGN-201ENST00000325617 BPTFQ12830 3046 aa13.67□□□□□ -0.22
CLGN-201ENST00000325617 CAPN9O14815 690 aa13.66□□□□□ -0.22
CLGN-201ENST00000325617 TRUB2O95900 331 aaKnown RBP13.66□□□□□ -0.22
CLGN-201ENST00000325617 ESRRAP11474 423 aaPredicted RBP13.66□□□□□ -0.22
CLGN-201ENST00000325617 SERPINB4P48594 390 aa13.66□□□□□ -0.22
CLGN-201ENST00000325617 PGGT1BP53609 377 aa13.66□□□□□ -0.22
CLGN-201ENST00000325617 ZNF667Q5HYK9 610 aa13.66□□□□□ -0.22
CLGN-201ENST00000325617 THEMIS2Q5TEJ8 643 aa13.66□□□□□ -0.22
CLGN-201ENST00000325617 DRICH1Q6PGQ1 229 aaPredicted RBP13.66□□□□□ -0.22
CLGN-201ENST00000325617 CES3Q6UWW8 571 aa13.66□□□□□ -0.22
CLGN-201ENST00000325617 POU5F2Q8N7G0 328 aa13.66□□□□□ -0.22
CLGN-201ENST00000325617 PHC3Q8NDX5 983 aa13.66□□□□□ -0.22
CLGN-201ENST00000325617 TRPM4Q8TD43 1214 aa13.66□□□□□ -0.22
CLGN-201ENST00000325617 NDRG1Q92597 394 aaKnown RBP13.66□□□□□ -0.22
CLGN-201ENST00000325617 FAM161BQ96MY7 647 aa13.66□□□□□ -0.22
CLGN-201ENST00000325617 PLAC1Q9HBJ0 212 aa13.66□□□□□ -0.22
CLGN-201ENST00000325617 PDGFCQ9NRA1 345 aa13.66□□□□□ -0.22
CLGN-201ENST00000325617 PACSIN3Q9UKS6 424 aa13.66□□□□□ -0.22
CLGN-201ENST00000325617 SYNJ2BP-COX16A0A087WUM0 186 aa13.66□□□□□ -0.22
CLGN-201ENST00000325617 B2RBV5 119 aa13.66□□□□□ -0.22
CLGN-201ENST00000325617 MAFGO15525 162 aa13.66□□□□□ -0.22
CLGN-201ENST00000325617 TBX10O75333 385 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms