RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 ACTL9Q8TC94 416 aa20.17■□□□□ 0.82
CHMP6-201ENST00000325167 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.17■□□□□ 0.82
CHMP6-201ENST00000325167 ACSF2Q96CM8 615 aaPredicted RBP20.17■□□□□ 0.82
CHMP6-201ENST00000325167 TTC25Q96NG3 672 aa20.17■□□□□ 0.82
CHMP6-201ENST00000325167 DUSP16Q9BY84 665 aa20.17■□□□□ 0.82
CHMP6-201ENST00000325167 CDC42EP4Q9H3Q1 356 aaKnown RBP20.17■□□□□ 0.82
CHMP6-201ENST00000325167 PRDM16Q9HAZ2 1276 aa20.17■□□□□ 0.82
CHMP6-201ENST00000325167 PTCH2Q9Y6C5 1203 aa20.17■□□□□ 0.82
CHMP6-201ENST00000325167 SGK1O00141 431 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 TTC4O95801 387 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 AGTP01019 485 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 CTSHP09668 335 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 CCDC130P13994 396 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 LMO2P25791 158 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 ATP5DP30049 168 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 THPOP40225 353 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 IRAK1P51617 712 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 FAM26DQ5JW98 314 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 SLC2A14Q8TDB8 520 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 FAM172AQ8WUF8 416 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 RSAD2Q8WXG1 361 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 KCTD13Q8WZ19 329 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 TLCD1Q96CP7 247 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 CCDC77Q9BR77 488 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 CALN1Q9BXU9 219 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 GOLGA2P5Q9HBQ8 144 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 AAASQ9NRG9 546 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.16■□□□□ 0.82
CHMP6-201ENST00000325167 BCCIPQ9P287 314 aaKnown RBP eCLIP20.16■□□□□ 0.82
CHMP6-201ENST00000325167 ARHGEF37A1IGU5 675 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 EIF3HO15372 352 aaKnown RBP eCLIP20.16■□□□□ 0.82
CHMP6-201ENST00000325167 RGS16O15492 202 aaPredicted RBP20.16■□□□□ 0.82
CHMP6-201ENST00000325167 PTPN1P18031 435 aaKnown RBP20.16■□□□□ 0.82
CHMP6-201ENST00000325167 TGM2P21980 687 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 STIP1P31948 543 aaKnown RBP20.16■□□□□ 0.82
CHMP6-201ENST00000325167 MLH1P40692 756 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 VPS41P49754 854 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 PPP2R2AP63151 447 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 GNGT1P63211 74 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 MFSD5Q6N075 450 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 SCUBE3Q8IX30 993 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 GAD1Q99259 594 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 FAM118BQ9BPY3 351 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 ZNF670Q9BS34 389 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 NGRNQ9NPE2 291 aaKnown RBP20.16■□□□□ 0.82
CHMP6-201ENST00000325167 NOD1Q9Y239 953 aa20.16■□□□□ 0.82
CHMP6-201ENST00000325167 ERICH4A6NGS2 130 aa20.15■□□□□ 0.82
CHMP6-201ENST00000325167 TULP2O00295 520 aa20.15■□□□□ 0.82
CHMP6-201ENST00000325167 RASGRF2O14827 1237 aa20.15■□□□□ 0.82
CHMP6-201ENST00000325167 TCEA3O75764 348 aa20.15■□□□□ 0.82
CHMP6-201ENST00000325167 GNRH1P01148 92 aa20.15■□□□□ 0.82
CHMP6-201ENST00000325167 ZFXP17010 805 aaPredicted RBP20.15■□□□□ 0.82
CHMP6-201ENST00000325167 NPR3P17342 541 aa20.15■□□□□ 0.82
CHMP6-201ENST00000325167 GPS1Q13098 491 aa20.15■□□□□ 0.82
CHMP6-201ENST00000325167 ARHGEF6Q15052 776 aa20.15■□□□□ 0.82
CHMP6-201ENST00000325167 ZSCAN26Q16670 478 aa20.15■□□□□ 0.82
CHMP6-201ENST00000325167 C15orf59Q2T9L4 293 aaPredicted RBP20.15■□□□□ 0.82
CHMP6-201ENST00000325167 TRNP1Q6NT89 227 aa20.15■□□□□ 0.82
CHMP6-201ENST00000325167 STRADAQ7RTN6 431 aa20.15■□□□□ 0.82
CHMP6-201ENST00000325167 CENPIQ92674 756 aaPredicted RBP20.15■□□□□ 0.82
CHMP6-201ENST00000325167 KHSRPQ92945 711 aaKnown RBP eCLIP20.15■□□□□ 0.82
CHMP6-201ENST00000325167 SENP8Q96LD8 212 aa20.15■□□□□ 0.82
CHMP6-201ENST00000325167 ZFP42Q96MM3 310 aa20.15■□□□□ 0.82
CHMP6-201ENST00000325167 CFAP57Q96MR6 1250 aa20.15■□□□□ 0.82
CHMP6-201ENST00000325167 SERPINB12Q96P63 405 aa20.15■□□□□ 0.82
CHMP6-201ENST00000325167 PEBP4Q96S96 227 aa20.15■□□□□ 0.82
CHMP6-201ENST00000325167 SRRDQ9UH36 339 aa20.15■□□□□ 0.82
CHMP6-201ENST00000325167 NOVA2Q9UNW9 492 aaKnown RBP20.15■□□□□ 0.82
CHMP6-201ENST00000325167 CFAP69A5D8W1 941 aa20.14■□□□□ 0.81
CHMP6-201ENST00000325167 PIK3R2O00459 728 aa20.14■□□□□ 0.81
CHMP6-201ENST00000325167 ABHD2P08910 425 aa20.14■□□□□ 0.81
CHMP6-201ENST00000325167 CCND3P30281 292 aaPredicted RBP20.14■□□□□ 0.81
CHMP6-201ENST00000325167 MDH1P40925 334 aaKnown RBP20.14■□□□□ 0.81
CHMP6-201ENST00000325167 DYNLT1P63172 113 aa20.14■□□□□ 0.81
CHMP6-201ENST00000325167 DPYSL3Q14195 570 aa20.14■□□□□ 0.81
CHMP6-201ENST00000325167 CYP4V2Q6ZWL3 525 aaPredicted RBP20.14■□□□□ 0.81
CHMP6-201ENST00000325167 OSTM1Q86WC4 334 aa20.14■□□□□ 0.81
CHMP6-201ENST00000325167 PSTKQ8IV42 348 aaKnown RBP20.14■□□□□ 0.81
CHMP6-201ENST00000325167 GSTCDQ8NEC7 633 aa20.14■□□□□ 0.81
CHMP6-201ENST00000325167 P3H4Q92791 437 aa20.14■□□□□ 0.81
CHMP6-201ENST00000325167 PIWIL1Q96J94 861 aaKnown RBP20.14■□□□□ 0.81
CHMP6-201ENST00000325167 UROC1Q96N76 676 aa20.14■□□□□ 0.81
CHMP6-201ENST00000325167 RNF157Q96PX1 679 aa20.14■□□□□ 0.81
CHMP6-201ENST00000325167 DDX23Q9BUQ8 820 aaKnown RBP20.14■□□□□ 0.81
CHMP6-201ENST00000325167 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.14■□□□□ 0.81
CHMP6-201ENST00000325167 CALCOCO1Q9P1Z2 691 aa20.14■□□□□ 0.81
CHMP6-201ENST00000325167 DDX20Q9UHI6 824 aaKnown RBP20.14■□□□□ 0.81
CHMP6-201ENST00000325167 PADI3Q9ULW8 664 aa20.14■□□□□ 0.81
CHMP6-201ENST00000325167 MKI67P46013 3256 aaKnown RBP20.14■□□□□ 0.81
CHMP6-201ENST00000325167 A0A0U1RQF3 1178 aa20.13■□□□□ 0.81
CHMP6-201ENST00000325167 ARL5CA6NH57 179 aa20.13■□□□□ 0.81
CHMP6-201ENST00000325167 GRAP2O75791 330 aa20.13■□□□□ 0.81
CHMP6-201ENST00000325167 FBXO21O94952 628 aa20.13■□□□□ 0.81
CHMP6-201ENST00000325167 SHBGP04278 402 aa20.13■□□□□ 0.81
CHMP6-201ENST00000325167 PCSK1P29120 753 aa20.13■□□□□ 0.81
CHMP6-201ENST00000325167 CHKAP35790 457 aa20.13■□□□□ 0.81
CHMP6-201ENST00000325167 EIF3EP60228 445 aaKnown RBP20.13■□□□□ 0.81
CHMP6-201ENST00000325167 ATP11AP98196 1134 aa20.13■□□□□ 0.81
CHMP6-201ENST00000325167 TRIM32Q13049 653 aa20.13■□□□□ 0.81
CHMP6-201ENST00000325167 ITGA7Q13683 1181 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms