RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 FBN1P35555 2871 aaKnown RBP7.17□□□□□ -1.26
CSTF3-201ENST00000323959 SLC26A4O43511 780 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 THP07101 528 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 ITGA2BP08514 1039 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 EPHA8P29322 1005 aaPredicted RBP7.17□□□□□ -1.26
CSTF3-201ENST00000323959 SLC39A14Q15043 492 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 GAB4Q2WGN9 574 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 NUDT18Q6ZVK8 323 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 DNAJB7Q7Z6W7 309 aaPredicted RBP7.17□□□□□ -1.26
CSTF3-201ENST00000323959 EXOC8Q8IYI6 725 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 LINC00301Q8NCQ3 95 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 CTCFLQ8NI51 663 aaPredicted RBP7.17□□□□□ -1.26
CSTF3-201ENST00000323959 TOE1Q96GM8 510 aaKnown RBP7.17□□□□□ -1.26
CSTF3-201ENST00000323959 NXF3Q9H4D5 531 aaKnown RBP7.17□□□□□ -1.26
CSTF3-201ENST00000323959 TM9SF3Q9HD45 589 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 MN1Q10571 1320 aaPredicted RBP7.17□□□□□ -1.26
CSTF3-201ENST00000323959 CBX4O00257 560 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 VILLO15195 856 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 RTN2O75298 545 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 NAB2Q15742 525 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 NPY5RQ15761 445 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 SDE2Q6IQ49 451 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 WDR36Q8NI36 951 aaKnown RBP7.17□□□□□ -1.26
CSTF3-201ENST00000323959 IPO4Q8TEX9 1081 aaKnown RBP7.17□□□□□ -1.26
CSTF3-201ENST00000323959 RABGGTAQ92696 567 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 PIGSQ96S52 555 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 LARP6Q9BRS8 491 aaKnown RBP7.17□□□□□ -1.26
CSTF3-201ENST00000323959 GPR174Q9BXC1 333 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 TRIM6Q9C030 488 aaPredicted RBP7.17□□□□□ -1.26
CSTF3-201ENST00000323959 IL21Q9HBE4 155 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 EIF2B4Q9UI10 523 aaKnown RBP7.17□□□□□ -1.26
CSTF3-201ENST00000323959 SLC5A6Q9Y289 635 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 PCDHA8Q9Y5H6 950 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 PCDHA10Q9Y5I2 948 aa7.17□□□□□ -1.26
CSTF3-201ENST00000323959 A0A1W2PQF6 199 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 MEIS1O00470 390 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 NOBOXO60393 691 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 ERLIN2O94905 339 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 ARPP19P56211 112 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 C21orf59P57076 290 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 CYP4F8P98187 520 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 TRIM29Q14134 588 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 C14orf80Q86SX3 495 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 RHPN2Q8IUC4 686 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 NOSTRINQ8IVI9 506 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 ARL14EPQ8N8R7 260 aaPredicted RBP7.16□□□□□ -1.26
CSTF3-201ENST00000323959 SPATA32Q96LK8 384 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 SLC29A3Q9BZD2 475 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 GLT8D2Q9H1C3 349 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 ITM2CQ9NQX7 267 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 TBC1D22BQ9NU19 505 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 GABBR1Q9UBS5 961 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 HPSEQ9Y251 543 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 ZNF638Q14966 1978 aaKnown RBP7.16□□□□□ -1.26
CSTF3-201ENST00000323959 SPDYE3A6NKU9 549 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 LEPRP48357 1165 aaKnown RBP7.16□□□□□ -1.26
CSTF3-201ENST00000323959 FAM160A1Q05DH4 1040 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 VEPH1Q14D04 833 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 ISXQ2M1V0 245 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 CTXN3Q4LDR2 81 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 CEP55Q53EZ4 464 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 SFMBT2Q5VUG0 894 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 USP17L6PQ6QN14 398 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 CD300LGQ6UXG3 332 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 MON1AQ86VX9 555 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 MICU3Q86XE3 530 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 CCDC148Q8NFR7 591 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 CCDC12Q8WUD4 166 aaPredicted RBP7.16□□□□□ -1.26
CSTF3-201ENST00000323959 NLRP4Q96MN2 994 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 GABRG3Q99928 467 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 NUP58Q9BVL2 599 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 TMEM63CQ9P1W3 806 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 OBSL1O75147 1896 aa7.16□□□□□ -1.26
CSTF3-201ENST00000323959 CENPEQ02224 2701 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 GFRA2O00451 464 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 ASAP2O43150 1006 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 TSPAN1O60635 241 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 FOSL1P15407 271 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 CMA1P23946 247 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 RXRGP48443 463 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 IL9RQ01113 521 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 PRKCEQ02156 737 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 SAFBQ15424 915 aaKnown RBP eCLIP7.15□□□□□ -1.26
CSTF3-201ENST00000323959 C3orf38Q5JPI3 329 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 SRBD1Q8N5C6 995 aaKnown RBP7.15□□□□□ -1.26
CSTF3-201ENST00000323959 APPL2Q8NEU8 664 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 HTR3CQ8WXA8 447 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 PGBD1Q96JS3 809 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 SMG9Q9H0W8 520 aaKnown RBP7.15□□□□□ -1.26
CSTF3-201ENST00000323959 CLSTN2Q9H4D0 955 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 BARHL2Q9NY43 387 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 USP25Q9UHP3 1055 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 COL4A3BPQ9Y5P4 624 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 APCP25054 2843 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 COL27A1Q8IZC6 1860 aaPredicted RBP7.15□□□□□ -1.26
CSTF3-201ENST00000323959 ZFC3H1O60293 1989 aaKnown RBP7.15□□□□□ -1.26
CSTF3-201ENST00000323959 GOLGA6L3A6NEY3 463 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 CUTAO60888 179 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 SHBQ15464 509 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 CT47A1Q5JQC4 288 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms