RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 MLXIPLQ9NP71 852 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 RIC8BQ9NVN3 520 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 ZC3H7BQ9UGR2 993 aaKnown RBP4.67□□□□□ -1.66
CNOT1-201ENST00000317147 ALPK3Q96L96 1907 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 BBIP1A8MTZ0 92 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 TM7SF2O76062 418 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 RALBP11234 206 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 BMP6P22004 513 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 FGFR4P22455 802 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 ERP29P30040 261 aaKnown RBP4.67□□□□□ -1.66
CNOT1-201ENST00000317147 RFC5P40937 340 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 NR2C2P49116 596 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 CBX3Q13185 183 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 PDK2Q15119 407 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 SPOPLQ6IQ16 392 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 DNAJB7Q7Z6W7 309 aaPredicted RBP4.67□□□□□ -1.66
CNOT1-201ENST00000317147 DDX42Q86XP3 938 aaKnown RBP eCLIP4.67□□□□□ -1.66
CNOT1-201ENST00000317147 CCDC117Q8IWD4 279 aaPredicted RBP4.67□□□□□ -1.66
CNOT1-201ENST00000317147 FAM167AQ96KS9 214 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 KANSL2Q9H9L4 492 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 ATP6V1HQ9UI12 483 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 PSMD13Q9UNM6 376 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 LRRK1Q38SD2 2015 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 GRIN2DO15399 1336 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 H7C0C1 242 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 ITGA10O75578 1167 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 ASMTLO95671 621 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 GLI1P08151 1106 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 CCNA2P20248 432 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 ATP5OP48047 213 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 LIG4P49917 911 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 ARSEP51690 589 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 MARSP56192 900 aaKnown RBP4.67□□□□□ -1.66
CNOT1-201ENST00000317147 C4orf50Q6ZRC1 276 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 TRIM67Q6ZTA4 783 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 ILDR1Q86SU0 546 aaPredicted RBP4.67□□□□□ -1.66
CNOT1-201ENST00000317147 RDM1Q8NG50 284 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 ZNF75CPQ92670 426 aaPredicted RBP4.67□□□□□ -1.66
CNOT1-201ENST00000317147 DACT3Q96B18 629 aaPredicted RBP4.67□□□□□ -1.66
CNOT1-201ENST00000317147 SCYL1Q96KG9 808 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 PUS3Q9BZE2 481 aaKnown RBP4.67□□□□□ -1.66
CNOT1-201ENST00000317147 MYLK2Q9H1R3 596 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 ADA2Q9NZK5 511 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 RAPGEFL1Q9UHV5 662 aa4.67□□□□□ -1.66
CNOT1-201ENST00000317147 MYO16Q9Y6X6 1858 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 SF3B1O75533 1304 aaKnown RBP eCLIP4.66□□□□□ -1.662e-6■■■■■ 31.6
CNOT1-201ENST00000317147 ISPDA4D126 451 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 KLF11O14901 512 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 ECE2O60344 883 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 POLBP06746 335 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 NPR3P17342 541 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 ME2P23368 584 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 FASP25445 335 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 HIBADHP31937 336 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 GUCY1A2P33402 732 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 NCKAP1LP55160 1127 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 KDSRQ06136 332 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 DRAP1Q14919 205 aaPredicted RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 KLHDC7AQ5VTJ3 777 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 NIPAL1Q6NVV3 410 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 PDXDC2PQ6P474 469 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 TMEM139Q8IV31 216 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 FCGR1BQ92637 280 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 NCLNQ969V3 563 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 CGREF1Q99674 301 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 CDC42EP4Q9H3Q1 356 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 SMYD3Q9H7B4 428 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 DYRK4Q9NR20 520 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 SLC5A4Q9NY91 659 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 NCKIPSDQ9NZQ3 722 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 ATPIF1Q9UII2 106 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 CNOT11Q9UKZ1 510 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 MKLN1Q9UL63 735 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 DRG1Q9Y295 367 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 GAKO14976 1311 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 UBE2Q2LH0YL09 131 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 ENO1P06733 434 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 GALCP54803 685 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 PDK3Q15120 406 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 SBK1Q52WX2 424 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 MAPKAPK5Q8IW41 473 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 TBC1D10AQ9BXI6 508 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 MAF1Q9H063 256 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 UBE2TQ9NPD8 197 aaPredicted RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 C20orf96Q9NUD7 363 aaPredicted RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 EMC3Q9P0I2 261 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 B3GNT3Q9Y2A9 372 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 WDFY3Q8IZQ1 3526 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 DDHD2O94830 711 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 IL1BP01584 269 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 S100A9P06702 114 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 CAPN1P07384 714 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 ANXA6P08133 673 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 PLEKP08567 350 aaPredicted RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 MYL2P10916 166 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 CYP2J2P51589 502 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 HERVK_113P62684 666 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 C1DQ13901 141 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 BBS9Q3SYG4 887 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 ANKRD23Q86SG2 305 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms