RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 HK2P52789 917 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 TUBA4AP68366 448 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 CHI3L2Q15782 390 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 ARMC3Q5W041 872 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 TIFABQ6ZNK6 161 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 MARCH10Q8NA82 808 aaPredicted RBP4.96□□□□□ -1.61
PTPN13-201ENST00000316707 GSTCDQ8NEC7 633 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 TBCBQ99426 244 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 NUF2Q9BZD4 464 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 CCDC68Q9H2F9 335 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 ALG13Q9NP73 1137 aaKnown RBP4.96□□□□□ -1.61
PTPN13-201ENST00000316707 XPO7Q9UIA9 1087 aaKnown RBP4.96□□□□□ -1.61
PTPN13-201ENST00000316707 PPM1HQ9ULR3 514 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 ZNF510Q9Y2H8 683 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 PCDHB4Q9Y5E5 795 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 GOLGA8IPA6NC78 632 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 GOLGA8JA6NMD2 632 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 PRR5-ARHGAP8B1AHC4 643 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 GOLGA8RI6L899 631 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 ZNF701M0R085 212 aaPredicted RBP4.96□□□□□ -1.61
PTPN13-201ENST00000316707 MAP3K13O43283 966 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 EXTL3O43909 919 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 SNNO75324 88 aaPredicted RBP4.96□□□□□ -1.61
PTPN13-201ENST00000316707 SRGAP2CP0DJJ0 459 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 SRGAP2BP0DMP2 458 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 DSG3P32926 999 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 CRHR1P34998 444 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 GABRB2P47870 512 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 PEX3P56589 373 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 ARHGAP8P85298 464 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 SNAPC2Q13487 334 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 SURF1Q15526 300 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 RWDD4Q6NW29 188 aaKnown RBP4.96□□□□□ -1.61
PTPN13-201ENST00000316707 KCNN1Q92952 543 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 EFHD1Q9BUP0 239 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 ACP6Q9NPH0 428 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 POMPQ9Y244 141 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 TELO2Q9Y4R8 837 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 G3V3G9 751 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 MX2P20592 715 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 PDE1BQ01064 536 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 DPYSL3Q14195 570 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 FASTKD3Q14CZ7 662 aaKnown RBP4.96□□□□□ -1.62
PTPN13-201ENST00000316707 DCAF8Q5TAQ9 597 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 C15orf39Q6ZRI6 1047 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 KSR1Q8IVT5 923 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 GLIS1Q8NBF1 620 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 RIN3Q8TB24 985 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 FERMT1Q9BQL6 677 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 TMEM121Q9BTD3 319 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 UNC45AQ9H3U1 944 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 TBC1D23Q9NUY8 699 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 DNAJC28Q9NX36 388 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 VPS28Q9UK41 221 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 PTBP2Q9UKA9 531 aaKnown RBP4.96□□□□□ -1.62
PTPN13-201ENST00000316707 BLOC1S6Q9UL45 172 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 LZTS1Q9Y250 596 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 GNPATO15228 680 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 PPARGP37231 505 aaPredicted RBP4.96□□□□□ -1.62
PTPN13-201ENST00000316707 STAT2P52630 851 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 ALDH18A1P54886 795 aaKnown RBP4.96□□□□□ -1.62
PTPN13-201ENST00000316707 MTTPP55157 894 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 HDAC4P56524 1084 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 GPSM2P81274 684 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 FOLH1Q04609 750 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 CRY2Q49AN0 593 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 SH2D5Q6ZV89 423 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 PODNQ7Z5L7 613 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.96□□□□□ -1.62
PTPN13-201ENST00000316707 ARHGEF4Q9NR80 690 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 ASTN2O75129 1339 aaPredicted RBP4.96□□□□□ -1.62
PTPN13-201ENST00000316707 MYH7P12883 1935 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 A0A088AWK7 358 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 SDR42E2A6NKP2 422 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 KBTBD13C9JR72 458 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 PDE5AO76074 875 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 STAMBPO95630 424 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 C6orf222P0C671 652 aaPredicted RBP4.96□□□□□ -1.62
PTPN13-201ENST00000316707 RAG1P15918 1043 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 POLD1P28340 1107 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 NLRP11P59045 1033 aaKnown RBP4.96□□□□□ -1.62
PTPN13-201ENST00000316707 BOLA3Q53S33 107 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 UGT2A3Q6UWM9 527 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 KBTBD6Q86V97 674 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 TERB1Q8NA31 727 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 FNDC8Q8TC99 324 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 ZNF606Q8WXB4 792 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 IKZF4Q9H2S9 585 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 BCAS3Q9H6U6 928 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 MAFGO15525 162 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 ZSCAN5DPP0CG00 497 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 KRT3P12035 628 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 ZNF12P17014 697 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 NPTX2P47972 431 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 PATL1Q86TB9 770 aaKnown RBP4.96□□□□□ -1.62
PTPN13-201ENST00000316707 ERI1Q8IV48 349 aaKnown RBP4.96□□□□□ -1.62
PTPN13-201ENST00000316707 SERAC1Q96JX3 654 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 BIRC8Q96P09 236 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 RTKNQ9BST9 563 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 DDX4Q9NQI0 724 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms