RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 PRELPP51888 382 aa9.02□□□□□ -0.97
USF3-201ENST00000316407 USP39Q53GS9 565 aaKnown RBP9.02□□□□□ -0.97
USF3-201ENST00000316407 ZNF669Q96BR6 464 aaPredicted RBP9.02□□□□□ -0.97
USF3-201ENST00000316407 EPB41L1Q9H4G0 881 aa9.02□□□□□ -0.97
USF3-201ENST00000316407 DBNDD1Q9H9R9 158 aa9.02□□□□□ -0.97
USF3-201ENST00000316407 COPRSQ9NQ92 184 aa9.02□□□□□ -0.97
USF3-201ENST00000316407 CYP39A1Q9NYL5 469 aa9.02□□□□□ -0.97
USF3-201ENST00000316407 ATG7O95352 703 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 LDHAP00338 332 aaKnown RBP9.01□□□□□ -0.97
USF3-201ENST00000316407 STX4Q12846 297 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 ERICH5Q6P6B1 374 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 RMDN3Q96TC7 470 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 PRKAB1Q9Y478 270 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 AFDNP55196 1824 aaKnown RBP9.01□□□□□ -0.97
USF3-201ENST00000316407 UBAP1LF5GYI3 381 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 TDP2O95551 362 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 GPR107Q5VW38 600 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 BTBD10Q9BSF8 475 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 TMEM121Q9BTD3 319 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 STK33Q9BYT3 514 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 SMARCAD1Q9H4L7 1026 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 CHST12Q9NRB3 414 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 ZNF446Q9NWS9 450 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 CIAO1O76071 339 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 SH3RF3Q8TEJ3 882 aaPredicted RBP9.01□□□□□ -0.97
USF3-201ENST00000316407 L2HGDHQ9H9P8 463 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 TMEM138Q9NPI0 162 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 ZBTB5O15062 677 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 STK32CQ86UX6 486 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.01□□□□□ -0.97
USF3-201ENST00000316407 H3BN98 237 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 DDX5P17844 614 aaKnown RBP9.01□□□□□ -0.97
USF3-201ENST00000316407 MAPK6Q16659 721 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 RNF220Q5VTB9 566 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 DNAAF5Q86Y56 855 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 ZNF614Q8N883 585 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 RSL24D1Q9UHA3 163 aaKnown RBP9.01□□□□□ -0.97
USF3-201ENST00000316407 ITIH6Q6UXX5 1313 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 LBPP18428 481 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 SPIDRQ14159 915 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 BHMTQ93088 406 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 FAM129BQ96TA1 746 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 UVRAGQ9P2Y5 699 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 DUSP12Q9UNI6 340 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 CAPN6Q9Y6Q1 641 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 STK36Q9NRP7 1315 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 SYNCRIPO60506 623 aaKnown RBP9.01□□□□□ -0.97
USF3-201ENST00000316407 ORC1Q13415 861 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 BDH2Q9BUT1 245 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 PIH1D1Q9NWS0 290 aaKnown RBP9.01□□□□□ -0.97
USF3-201ENST00000316407 VWA5AO00534 786 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 SEC24AO95486 1093 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 THRAP10827 490 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 FASP25445 335 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 PHKA2P46019 1235 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 STARP49675 285 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 WDR93Q6P2C0 686 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 ULK3Q6PHR2 472 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 ASAP3Q8TDY4 903 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 MUC3BQ9H195 1237 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 ZNF224Q9NZL3 707 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 RRN3P2A6NIE6 340 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 PDK3Q15120 406 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 CACHD1Q5VU97 1274 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 CNKSR1Q969H4 720 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 TRPV5Q9NQA5 729 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 TDRKHQ9Y2W6 561 aaKnown RBP9.01□□□□□ -0.97
USF3-201ENST00000316407 MAP3K15Q6ZN16 1313 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 EFCAB10A6NFE3 127 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 PDGFRAP16234 1089 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 ACOT2P49753 483 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 POC5Q8NA72 575 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 TFB1MQ8WVM0 346 aaKnown RBP9.01□□□□□ -0.97
USF3-201ENST00000316407 DCXO43602 365 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 CYP4B1P13584 511 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 ATP2C1P98194 919 aaPredicted RBP9.01□□□□□ -0.97
USF3-201ENST00000316407 SURF1Q15526 300 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 OLFML2AQ68BL7 652 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 TRIM9Q9C026 710 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 GABBR1Q9UBS5 961 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 FLT1P17948 1338 aa9.01□□□□□ -0.97
USF3-201ENST00000316407 H2AFYO75367 372 aaKnown RBP9□□□□□ -0.97
USF3-201ENST00000316407 TAP1Q03518 808 aa9□□□□□ -0.97
USF3-201ENST00000316407 FNBP1LQ5T0N5 605 aa9□□□□□ -0.97
USF3-201ENST00000316407 ZCCHC23Q6ZST2 131 aa9□□□□□ -0.97
USF3-201ENST00000316407 UBXN6Q9BZV1 441 aa9□□□□□ -0.97
USF3-201ENST00000316407 ALG6Q9Y672 507 aa9□□□□□ -0.97
USF3-201ENST00000316407 CDC40O60508 579 aaKnown RBP eCLIP9□□□□□ -0.97
USF3-201ENST00000316407 CST8O60676 142 aa9□□□□□ -0.97
USF3-201ENST00000316407 SLC9A8Q9Y2E8 581 aa9□□□□□ -0.97
USF3-201ENST00000316407 HEATR9A2RTY3 570 aa9□□□□□ -0.97
USF3-201ENST00000316407 ATP6V1G1O75348 118 aa9□□□□□ -0.97
USF3-201ENST00000316407 SLC1A6P48664 564 aa9□□□□□ -0.97
USF3-201ENST00000316407 ZRANB3Q5FWF4 1079 aa9□□□□□ -0.97
USF3-201ENST00000316407 PTRHD1Q6GMV3 140 aaKnown RBP9□□□□□ -0.97
USF3-201ENST00000316407 THOC7Q6I9Y2 204 aaKnown RBP9□□□□□ -0.97
USF3-201ENST00000316407 TCAIMQ8N3R3 496 aa9□□□□□ -0.97
USF3-201ENST00000316407 RIC8BQ9NVN3 520 aa9□□□□□ -0.97
USF3-201ENST00000316407 L1RE1Q9UN81 338 aa9□□□□□ -0.97
USF3-201ENST00000316407 PDS5AQ29RF7 1337 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms