RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 LIN28AQ9H9Z2 209 aaKnown RBP18.78■□□□□ 0.6
SPSB4-201ENST00000310546 MAD1L1Q9Y6D9 718 aa18.78■□□□□ 0.6
SPSB4-201ENST00000310546 GREB1LQ9C091 1923 aaPredicted RBP18.78■□□□□ 0.6
SPSB4-201ENST00000310546 TRIM43BA6NCK2 446 aa18.77■□□□□ 0.6
SPSB4-201ENST00000310546 PROSCO94903 275 aa18.77■□□□□ 0.6
SPSB4-201ENST00000310546 SSTR3P32745 418 aaPredicted RBP18.77■□□□□ 0.6
SPSB4-201ENST00000310546 FAAP100Q0VG06 881 aa18.77■□□□□ 0.6
SPSB4-201ENST00000310546 KRT81Q14533 505 aa18.77■□□□□ 0.6
SPSB4-201ENST00000310546 LPIN1Q14693 890 aa18.77■□□□□ 0.6
SPSB4-201ENST00000310546 CCDC142Q17RM4 750 aa18.77■□□□□ 0.6
SPSB4-201ENST00000310546 SMYD1Q8NB12 490 aa18.77■□□□□ 0.6
SPSB4-201ENST00000310546 MAF1Q9H063 256 aa18.77■□□□□ 0.6
SPSB4-201ENST00000310546 ZNF180Q9UJW8 692 aa18.77■□□□□ 0.6
SPSB4-201ENST00000310546 SHOC2Q9UQ13 582 aa18.77■□□□□ 0.6
SPSB4-201ENST00000310546 TGFB2P61812 414 aa18.77■□□□□ 0.6
SPSB4-201ENST00000310546 CHI3L2Q15782 390 aa18.77■□□□□ 0.6
SPSB4-201ENST00000310546 GRAMD4Q6IC98 578 aa18.77■□□□□ 0.6
SPSB4-201ENST00000310546 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.77■□□□□ 0.6
SPSB4-201ENST00000310546 ACSF2Q96CM8 615 aaPredicted RBP18.77■□□□□ 0.6
SPSB4-201ENST00000310546 FAM20AQ96MK3 541 aa18.77■□□□□ 0.6
SPSB4-201ENST00000310546 SRPK1Q96SB4 655 aaKnown RBP18.77■□□□□ 0.6
SPSB4-201ENST00000310546 C1orf21Q9H246 121 aa18.77■□□□□ 0.6
SPSB4-201ENST00000310546 CYB561D2O14569 222 aa18.77■□□□□ 0.59
SPSB4-201ENST00000310546 COPEO14579 308 aa18.77■□□□□ 0.59
SPSB4-201ENST00000310546 SRGAP2CP0DJJ0 459 aa18.77■□□□□ 0.59
SPSB4-201ENST00000310546 SRGAP2BP0DMP2 458 aa18.77■□□□□ 0.59
SPSB4-201ENST00000310546 ANO5Q75V66 913 aa18.77■□□□□ 0.59
SPSB4-201ENST00000310546 HPS6Q86YV9 775 aa18.77■□□□□ 0.59
SPSB4-201ENST00000310546 ZFRQ96KR1 1074 aaKnown RBP18.77■□□□□ 0.59
SPSB4-201ENST00000310546 BTBD9Q96Q07 612 aa18.77■□□□□ 0.59
SPSB4-201ENST00000310546 SLX1AQ9BQ83 275 aa18.77■□□□□ 0.59
SPSB4-201ENST00000310546 SLC13A1Q9BZW2 595 aa18.77■□□□□ 0.59
SPSB4-201ENST00000310546 IQANK1A0A1B0GTG1 560 aa18.76■□□□□ 0.59
SPSB4-201ENST00000310546 TBX3O15119 743 aa18.76■□□□□ 0.59
SPSB4-201ENST00000310546 INHBAP08476 426 aa18.76■□□□□ 0.59
SPSB4-201ENST00000310546 CIAPIN1Q6FI81 312 aa18.76■□□□□ 0.59
SPSB4-201ENST00000310546 DENND5BQ6ZUT9 1274 aa18.76■□□□□ 0.59
SPSB4-201ENST00000310546 E2F7Q96AV8 911 aa18.76■□□□□ 0.59
SPSB4-201ENST00000310546 GMLQ99445 158 aa18.76■□□□□ 0.59
SPSB4-201ENST00000310546 DHRS4Q9BTZ2 278 aa18.76■□□□□ 0.59
SPSB4-201ENST00000310546 CNTN3Q9P232 1028 aa18.76■□□□□ 0.59
SPSB4-201ENST00000310546 PSTPIP1O43586 416 aa18.76■□□□□ 0.59
SPSB4-201ENST00000310546 DNAJA2O60884 412 aa18.76■□□□□ 0.59
SPSB4-201ENST00000310546 HOXA13P31271 388 aaPredicted RBP18.76■□□□□ 0.59
SPSB4-201ENST00000310546 NSFP46459 744 aaKnown RBP18.76■□□□□ 0.59
SPSB4-201ENST00000310546 ALDH1A3P47895 512 aa18.76■□□□□ 0.59
SPSB4-201ENST00000310546 CCR3P51677 355 aa18.76■□□□□ 0.59
SPSB4-201ENST00000310546 VCPP55072 806 aaKnown RBP18.76■□□□□ 0.59
SPSB4-201ENST00000310546 SLC9A9Q8IVB4 645 aa18.76■□□□□ 0.59
SPSB4-201ENST00000310546 KATNAL2Q8IYT4 538 aa18.76■□□□□ 0.59
SPSB4-201ENST00000310546 EXD1Q8NHP7 514 aa18.76■□□□□ 0.59
SPSB4-201ENST00000310546 DCUN1D1Q96GG9 259 aa18.76■□□□□ 0.59
SPSB4-201ENST00000310546 WDR83Q9BRX9 315 aaKnown RBP18.76■□□□□ 0.59
SPSB4-201ENST00000310546 OXCT2Q9BYC2 517 aaPredicted RBP18.76■□□□□ 0.59
SPSB4-201ENST00000310546 MRPS26Q9BYN8 205 aaKnown RBP18.76■□□□□ 0.59
SPSB4-201ENST00000310546 SAE1Q9UBE0 346 aaPredicted RBP18.76■□□□□ 0.59
SPSB4-201ENST00000310546 BRCA1P38398 1863 aaKnown RBP18.75■□□□□ 0.59
SPSB4-201ENST00000310546 P4HA2O15460 535 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 POLR2MP0CAP2 368 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 TCF4P15884 667 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 SNAPC2Q13487 334 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 CES4AQ5XG92 561 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 MFSD7Q6UXD7 560 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 CRLF3Q8IUI8 442 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 PASD1Q8IV76 773 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 MARVELD2Q8N4S9 558 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 FAM81BQ96LP2 452 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 CCDC17Q96LX7 622 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 C11orf70Q9BRQ4 267 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 SEL1LQ9UBV2 794 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 POMPQ9Y244 141 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 SERPINA6P08185 405 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 NAA20P61599 178 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 PHEXP78562 749 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 PEX6Q13608 980 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 BTG3Q14201 252 aaPredicted RBP18.75■□□□□ 0.59
SPSB4-201ENST00000310546 SYCP2LQ5T4T6 812 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 ZNF410Q86VK4 478 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 HSD17B14Q9BPX1 270 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 Q9H521 79 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 CDH22Q9UJ99 828 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 AK5Q9Y6K8 562 aa18.75■□□□□ 0.59
SPSB4-201ENST00000310546 LOC100653049A0A140TA62 436 aa18.74■□□□□ 0.59
SPSB4-201ENST00000310546 KRT34O76011 436 aa18.74■□□□□ 0.59
SPSB4-201ENST00000310546 TNFAIP8O95379 198 aa18.74■□□□□ 0.59
SPSB4-201ENST00000310546 STT3AP46977 705 aa18.74■□□□□ 0.59
SPSB4-201ENST00000310546 UBXN2AP68543 259 aa18.74■□□□□ 0.59
SPSB4-201ENST00000310546 KBTBD12Q3ZCT8 623 aa18.74■□□□□ 0.59
SPSB4-201ENST00000310546 GPATCH4Q5T3I0 446 aaKnown RBP18.74■□□□□ 0.59
SPSB4-201ENST00000310546 ZCCHC23Q6ZST2 131 aa18.74■□□□□ 0.59
SPSB4-201ENST00000310546 TTC13Q8NBP0 860 aa18.74■□□□□ 0.59
SPSB4-201ENST00000310546 C20orf27Q9GZN8 174 aa18.74■□□□□ 0.59
SPSB4-201ENST00000310546 FAIMQ9NVQ4 179 aa18.74■□□□□ 0.59
SPSB4-201ENST00000310546 RAB20Q9NX57 234 aa18.74■□□□□ 0.59
SPSB4-201ENST00000310546 HSPBP1Q9NZL4 362 aa18.74■□□□□ 0.59
SPSB4-201ENST00000310546 FAM155BO75949 473 aa18.74■□□□□ 0.59
SPSB4-201ENST00000310546 ZFXP17010 805 aaPredicted RBP18.74■□□□□ 0.59
SPSB4-201ENST00000310546 ZNF24P17028 368 aa18.74■□□□□ 0.59
SPSB4-201ENST00000310546 CDH2P19022 906 aaPredicted RBP18.74■□□□□ 0.59
SPSB4-201ENST00000310546 MTTPP55157 894 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms